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CCDC85C coiled-coil domain containing 85C [ Bos taurus (domestic cattle) ]

Gene ID: 617455, updated on 17-Aug-2024

Summary

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Official Symbol
CCDC85Cprovided by VGNC
Official Full Name
coiled-coil domain containing 85Cprovided by VGNC
Primary source
VGNC:VGNC:26925
See related
BGD:BT21238; Ensembl:ENSBTAG00000025181
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 21
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 21 NC_037348.1 (64523705..64601797, complement)

Chromosome 21 - NC_037348.1Genomic Context describing neighboring genes Neighboring gene SET domain containing 3, actin histidine methyltransferase Neighboring gene cyclin K Neighboring gene HHIP like 1 Neighboring gene cytochrome P450 family 46 subfamily A member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037348.1 Chromosome 21 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in apical junction complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coiled-coil domain-containing protein 85C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037348.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    64523705..64601797 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024982152.2 → XP_024837920.1  coiled-coil domain-containing protein 85C isoform X3

    Conserved Domains (1) summary
    pfam10226
    Location:15 → 206
    CCDC85; CCDC85 family

  2. XM_015459366.3 → XP_015314852.2  coiled-coil domain-containing protein 85C isoform X2

    UniProtKB/TrEMBL
    F1MZJ7
    Related
    ENSBTAP00000035166.5, ENSBTAT00000035288.6
    Conserved Domains (1) summary
    pfam10226
    Location:15 → 206
    CCDC85; CCDC85 family

  3. XM_024982151.2 → XP_024837919.1  coiled-coil domain-containing protein 85C isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MF18
    Related
    ENSBTAP00000069687.1, ENSBTAT00000076041.2
    Conserved Domains (1) summary
    pfam10226
    Location:15 → 206
    CCDC85; CCDC85 family

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001144998.1: Suppressed sequence

    Description
    NM_001144998.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein Strain
Heading Accession and Version

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