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RPL9P7 ribosomal protein L9 pseudogene 7 [ Homo sapiens (human) ]

Gene ID: 6126, updated on 27-Aug-2024

Summary

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Official Symbol
RPL9P7provided by HGNC
Official Full Name
ribosomal protein L9 pseudogene 7provided by HGNC
Primary source
HGNC:HGNC:30335
See related
Ensembl:ENSG00000238103 AllianceGenome:HGNC:30335
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL9L1; RPL9P1; RPL9_19_1768
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Genomic context

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Location:
Xp22.11
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (23836644..23837346, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (23420325..23421027, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (23854761..23855463, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene ReSE screen-validated silencer GRCh37_chrX:23770819-23771006 Neighboring gene SAT1 divergent transcript Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:23798968-23799606 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chrX:23800811-23802010 Neighboring gene uncharacterized LOC127933115 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chrX:23825194-23826393 Neighboring gene spermidine/spermine N1-acetyltransferase 1 Neighboring gene apolipoprotein O Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:23900936-23901702 Neighboring gene ReSE screen-validated silencer GRCh37_chrX:23905519-23905696 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20707 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29494 Neighboring gene chromosome X open reading frame 58 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:23970710-23971248 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:23971249-23971786 Neighboring gene Sharpr-MPRA regulatory region 13558 Neighboring gene kelch like family member 15 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29495 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20708 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20709 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20710 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:24043667-24044171 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:24044172-24044675

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural organization and chromosomal localization of the human ribosomal protein L9 gene. Mazuruk K, et al. Biochim Biophys Acta, 1996 Mar 1. PMID 8597601
  2. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • 60S ribosomal protein L9 pseudogene 1
  • ribosomal protein L9 pseudogene 1
  • ribosomal protein L9-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_001192.4 

    Range
    101..803
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    23836644..23837346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    23420325..23421027 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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