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FTCD formimidoyltransferase cyclodeaminase [ Canis lupus familiaris (dog) ]

Gene ID: 607685, updated on 17-Aug-2024

Summary

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Official Symbol
FTCDprovided by VGNC
Official Full Name
formimidoyltransferase cyclodeaminaseprovided by VGNC
Primary source
VGNC:VGNC:41002
See related
Ensembl:ENSCAFG00845024727
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See FTCD in Genome Data Viewer
Location:
chromosome: 31
Exon count:
14
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 31 NC_051835.1 (39092693..39105364, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 31 NC_006613.4 (38679583..38692067, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 31 NC_049252.1 (39433241..39445917, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 31 NC_049291.1 (38954390..38967042, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 31 NC_049772.1 (38914802..38927725, complement)

Chromosome 31 - NC_051835.1Genomic Context describing neighboring genes Neighboring gene collagen type VI alpha 1 chain Neighboring gene collagen type VI alpha 2 chain Neighboring gene uncharacterized LOC119867098 Neighboring gene spermatogenesis and centriole associated 1 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables folic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
formimidoyltransferase-cyclodeaminase; LOW QUALITY PROTEIN: formimidoyltransferase-cyclodeaminase
Names
formiminotransferase cyclodeaminase
XP_038299081.1
XP_038317759.1
XP_038374142.1
XP_038437080.1
XP_038501460.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051835.1 Reference ROS_Cfam_1.0

    Range
    39092693..39105364 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038443153.1 → XP_038299081.1  LOW QUALITY PROTEIN: formimidoyltransferase-cyclodeaminase isoform X1

    UniProtKB/TrEMBL
    A0A8C0T7R8
    Related
    ENSCAFP00845034220.1, ENSCAFT00845043677.1
    Conserved Domains (2) summary
    TIGR02024
    Location:1 → 328
    FtcD; glutamate formiminotransferase
    pfam04961
    Location:347 → 496
    FTCD_C; Formiminotransferase-cyclodeaminase

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049291.1 Alternate UMICH_Zoey_3.1

    Range
    38954390..38967042 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038518214.1 → XP_038374142.1  formimidoyltransferase-cyclodeaminase isoform X1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049772.1 Alternate UNSW_CanFamBas_1.0

    Range
    38914802..38927725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038645532.1 → XP_038501460.1  formimidoyltransferase-cyclodeaminase isoform X1

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049252.1 Alternate UU_Cfam_GSD_1.0

    Range
    39433241..39445917 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038581152.1 → XP_038437080.1  formimidoyltransferase-cyclodeaminase isoform X1

    UniProtKB/TrEMBL
    A0A8C0T7R8

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006613.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    38679583..38692067 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038461831.1 → XP_038317759.1  formimidoyltransferase-cyclodeaminase isoform X2

    UniProtKB/TrEMBL
    A0A8P0T4V7
    Conserved Domains (2) summary
    TIGR02024
    Location:1 → 328
    FtcD; glutamate formiminotransferase
    pfam04961
    Location:425 → 520
    FTCD_C; Formiminotransferase-cyclodeaminase
Nucleotide Protein
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