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TMEM234 transmembrane protein 234 [ Homo sapiens (human) ]

Gene ID: 56063, updated on 7-Jun-2020

Summary

Official Symbol
TMEM234provided by HGNC
Official Full Name
transmembrane protein 234provided by HGNC
Primary source
HGNC:HGNC:28837
See related
Ensembl:ENSG00000160055
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
AASL548; C1orf91; PRO1105; RP4-622L5; dJ622L5.7
Expression
Ubiquitous expression in testis (RPKM 5.0), thyroid (RPKM 3.6) and 25 other tissues See more
Orthologs

Genomic context

See TMEM234 in Genome Data Viewer
Location:
1p35.2
Exon count:
15
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (32204807..32222371, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (32680040..32687954, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene karyopherin subunit alpha 6 Neighboring gene taxilin alpha Neighboring gene coiled-coil domain containing 28B Neighboring gene doublecortin domain containing 2B Neighboring gene IQ motif containing C Neighboring gene eukaryotic translation initiation factor 3 subunit I Neighboring gene myotubularin related protein 9 like, pseudogene Neighboring gene family with sequence similarity 167 member B

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ90779

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001366191.2NP_001353120.1  transmembrane protein 234 isoform b precursor

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5) encodes the longer isoform (b).
    Source sequence(s)
    AL049795
    Related
    ENSP00000344021.3, ENST00000344461.7
    Conserved Domains (1) summary
    pfam10639
    Location:18126
    TMEM234; Putative transmembrane family 234
  2. NM_019118.5NP_061991.3  transmembrane protein 234 isoform a precursor

    See identical proteins and their annotated locations for NP_061991.3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes isoform a.
    Source sequence(s)
    AK295232, BC004885
    Consensus CDS
    CCDS356.2
    UniProtKB/Swiss-Prot
    Q8WY98
    UniProtKB/TrEMBL
    B4DHR3
    Related
    ENSP00000309792.6, ENST00000309777.10
    Conserved Domains (1) summary
    pfam10639
    Location:18126
    TMEM234; Putative transmembrane family 234

RNA

  1. NR_133634.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) contains an alternate exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AK295232, BC004885, BP307734
  2. NR_133635.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) contains several additional exons at the 3' end compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AK295232, BC038842
  3. NR_133636.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) contains an alternate internal exon and several additional exons at the 3' end compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AK295232, BC001256
    Related
    ENST00000491434.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    32204807..32222371 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017001814.1XP_016857303.1  transmembrane protein 234 isoform X2

  2. XM_017001815.1XP_016857304.1  transmembrane protein 234 isoform X3

    Conserved Domains (1) summary
    pfam10639
    Location:18126
    TMEM234; Putative transmembrane family 234
  3. XM_017001828.1XP_016857317.1  transmembrane protein 234 isoform X6

    UniProtKB/Swiss-Prot
    Q8WY98
    Conserved Domains (1) summary
    pfam10639
    Location:18126
    TMEM234; Putative transmembrane family 234
  4. XM_017001827.1XP_016857316.1  transmembrane protein 234 isoform X6

    UniProtKB/Swiss-Prot
    Q8WY98
    Conserved Domains (1) summary
    pfam10639
    Location:18126
    TMEM234; Putative transmembrane family 234
  5. XM_011541795.2XP_011540097.1  transmembrane protein 234 isoform X5

    See identical proteins and their annotated locations for XP_011540097.1

    UniProtKB/TrEMBL
    B4DHR3
    Conserved Domains (1) summary
    pfam10639
    Location:18116
    TMEM234; Putative transmembrane family 234
  6. XM_024448429.1XP_024304197.1  transmembrane protein 234 isoform X6

    Conserved Domains (1) summary
    pfam10639
    Location:18126
    TMEM234; Putative transmembrane family 234
  7. XM_024448415.1XP_024304183.1  transmembrane protein 234 isoform X1

    Conserved Domains (1) summary
    pfam10639
    Location:18123
    TMEM234; Putative transmembrane family 234
  8. XM_017001816.2XP_016857305.1  transmembrane protein 234 isoform X3

    Conserved Domains (1) summary
    pfam10639
    Location:18126
    TMEM234; Putative transmembrane family 234
  9. XM_017001830.2XP_016857319.1  transmembrane protein 234 isoform X6

    UniProtKB/Swiss-Prot
    Q8WY98
    Conserved Domains (1) summary
    pfam10639
    Location:18126
    TMEM234; Putative transmembrane family 234
  10. XM_024448427.1XP_024304195.1  transmembrane protein 234 isoform X6

    Conserved Domains (1) summary
    pfam10639
    Location:18126
    TMEM234; Putative transmembrane family 234
  11. XM_024448414.1XP_024304182.1  transmembrane protein 234 isoform X1

    Related
    ENST00000466796.1
    Conserved Domains (1) summary
    pfam10639
    Location:18123
    TMEM234; Putative transmembrane family 234
  12. XM_017001813.1XP_016857302.1  transmembrane protein 234 isoform X1

    UniProtKB/Swiss-Prot
    Q8WY98
    Conserved Domains (1) summary
    pfam10639
    Location:18123
    TMEM234; Putative transmembrane family 234
  13. XM_017001812.1XP_016857301.1  transmembrane protein 234 isoform X1

    UniProtKB/Swiss-Prot
    Q8WY98
    Related
    ENSP00000362695.1, ENST00000373593.5
    Conserved Domains (1) summary
    pfam10639
    Location:18123
    TMEM234; Putative transmembrane family 234
  14. XM_017001825.1XP_016857314.1  transmembrane protein 234 isoform X5

    UniProtKB/TrEMBL
    B4DHR3
    Conserved Domains (1) summary
    pfam10639
    Location:18116
    TMEM234; Putative transmembrane family 234
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