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eif2b3 eukaryotic translation initiation factor 2B subunit gamma [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 549751, updated on 17-Aug-2024

Summary

Official Symbol
eif2b3provided by Xenbase
Official Full Name
eukaryotic translation initiation factor 2B subunit gammaprovided by Xenbase
Primary source
Xenbase:XB-GENE-961434
See related
Ensembl:ENSXETG00000018885
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
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Genomic context

Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (90701298..90719571)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (72890636..72909513, complement)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene target of EGR1, exonuclease Neighboring gene testis associated actin remodelling kinase 2 Neighboring gene patched 2 Neighboring gene BTB domain containing 19

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within translation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within translational initiation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
translation initiation factor eIF2B subunit gamma
Names
eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001016997.3NP_001016997.2  translation initiation factor eIF2B subunit gamma

    Status: VALIDATED

    Source sequence(s)
    BC157160, CR423758, DN070564
    UniProtKB/TrEMBL
    A0A6I8Q006, A0A8J0PIQ9, A9UL85
    Related
    ENSXETP00000065488.1, ENSXETT00000087651.2
    Conserved Domains (2) summary
    cd04198
    Location:5217
    eIF-2B_gamma_N; The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2
    COG1208
    Location:4439
    GCD1; NDP-sugar pyrophosphorylase, includes eIF-2Bgamma, eIF-2Bepsilon, and LPS biosynthesis proteins [Translation, ribosomal structure and biogenesis, Cell wall/membrane/envelope biogenesis]

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    90701298..90719571
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)