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SS1G_03070 hypothetical protein [ Sclerotinia sclerotiorum 1980 UF-70 ]

Gene ID: 5492667, updated on 25-Jan-2024

Summary

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Gene symbol
SS1G_03070
Gene description
hypothetical protein
Locus tag
SS1G_03070
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Sclerotinia sclerotiorum 1980 UF-70 (strain: 1980)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia
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Genomic context

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Location:
chromosome: Unknown
Exon count:
3

NW_001820833.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001820833.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3K4 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Set1C/COMPASS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001820833.1 Reference assembly

    Range
    2518180..2522099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001596797.1 → XP_001596847.1  hypothetical protein SS1G_03070 [Sclerotinia sclerotiorum 1980 UF-70]

    See identical proteins and their annotated locations for XP_001596847.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1D9Q2J7, A7ECN1
    Conserved Domains (6) summary
    smart00317
    Location:1122 → 1243
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
    smart00508
    Location:1248 → 1264
    PostSET; Cysteine-rich motif following a subset of SET domains
    COG2940
    Location:1081 → 1264
    SET; SET domain-containing protein (function unknown) [General function prediction only]
    pfam11764
    Location:951 → 1112
    N-SET; COMPASS (Complex proteins associated with Set1p) component N
    pfam11767
    Location:466 → 534
    SET_assoc; Histone lysine methyltransferase SET associated
    cl17169
    Location:282 → 387
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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