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RBFOX1 RNA binding fox-1 homolog 1 [ Homo sapiens (human) ]

Gene ID: 54715, updated on 16-Oct-2021

Summary

Official Symbol
RBFOX1provided by HGNC
Official Full Name
RNA binding fox-1 homolog 1provided by HGNC
Primary source
HGNC:HGNC:18222
See related
Ensembl:ENSG00000078328 MIM:605104
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
2BP1; FOX1; A2BP1; FOX-1; HRNBP1
Summary
The Fox-1 family of RNA-binding proteins is evolutionarily conserved, and regulates tissue-specific alternative splicing in metazoa. Fox-1 recognizes a (U)GCAUG stretch in regulated exons or in flanking introns. The protein binds to the C-terminus of ataxin-2 and may contribute to the restricted pathology of spinocerebellar ataxia type 2 (SCA2). Ataxin-2 is the product of the SCA2 gene which causes familial neurodegenerative diseases. Fox-1 and ataxin-2 are both localized in the trans-Golgi network. Several alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2011]
Expression
Biased expression in brain (RPKM 11.3) and heart (RPKM 2.5) See more
Orthologs
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Genomic context

See RBFOX1 in Genome Data Viewer
Location:
16p13.3
Exon count:
29
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (5239752..7713343)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (6069025..7763342)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984828 Neighboring gene uncharacterized LOC105371067 Neighboring gene 40S ribosomal protein S24 pseudogene Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 14 Neighboring gene long intergenic non-protein coding RNA 2164 Neighboring gene RPS3A pseudogene 48 Neighboring gene small nuclear ribonucleoprotein polypeptide C pseudogene 20 Neighboring gene nucleophosmin 1 pseudogene 3 Neighboring gene long intergenic non-protein coding RNA 1570 Neighboring gene microRNA 8065 Neighboring gene meiotic recombination hotspot CG Neighboring gene RNA, U7 small nuclear 99 pseudogene Neighboring gene RNA, U6 small nuclear 457, pseudogene Neighboring gene uncharacterized LOC105371068 Neighboring gene RNA, U6 small nuclear 328, pseudogene Neighboring gene ribosomal protein S26 pseudogene 51 Neighboring gene uncharacterized LOC105371069 Neighboring gene uncharacterized LOC105371070

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

Associated conditions

Description Tests
A genome-wide association study of sleep habits and insomnia.
GeneReviews: Not available
A genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder.
GeneReviews: Not available
Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study.
GeneReviews: Not available
Does parental expressed emotion moderate genetic effects in ADHD? An exploration using a genome wide association scan.
GeneReviews: Not available
Genetics meets metabolomics: a genome-wide association study of metabolite profiles in human serum.
GeneReviews: Not available
Genome-wide association and admixture analysis of glaucoma in the Women's Health Initiative.
GeneReviews: Not available
Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
GeneReviews: Not available
Genome-wide association study and meta-analysis of intraocular pressure.
GeneReviews: Not available
Genome-wide association study identifies novel loci associated with circulating phospho- and sphingolipid concentrations.
GeneReviews: Not available
Genome-wide association study identifies susceptibility loci for dengue shock syndrome at MICB and PLCE1.
GeneReviews: Not available
Genome-wide association study of chronic periodontitis in a general German population.
GeneReviews: Not available
Genome-Wide Association Study of Primary Dentition Pit-and-Fissure and Smooth Surface Caries.
GeneReviews: Not available
Genome-wide meta-analyses of multiancestry cohorts identify multiple new susceptibility loci for refractive error and myopia.
GeneReviews: Not available
Genome-wide meta-analysis for severe diabetic retinopathy.
GeneReviews: Not available
Genome-wide meta-analysis of myopia and hyperopia provides evidence for replication of 11 Loci.
GeneReviews: Not available
Genomewide association study of movement-related adverse antipsychotic effects.
GeneReviews: Not available
Identification of heart rate-associated loci and their effects on cardiac conduction and rhythm disorders.
GeneReviews: Not available
Integrated Genome-wide Association, Coexpression Network, and Expression Single Nucleotide Polymorphism Analysis Identifies Novel Pathway in Allergic Rhinitis.
GeneReviews: Not available
Meta-analysis of genome-wide association studies in five cohorts reveals common variants in RBFOX1, a regulator of tissue-specific splicing, associated with refractive error.
GeneReviews: Not available
Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
GeneReviews: Not available

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables RNA binding NAS
Non-traceable Author Statement
more info
PubMed 
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 
enables mRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables protein C-terminus binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in RNA splicing IEA
Inferred from Electronic Annotation
more info
 
involved_in RNA transport NAS
Non-traceable Author Statement
more info
PubMed 
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 
involved_in nervous system development IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in neuromuscular process controlling balance IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of alternative mRNA splicing, via spliceosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in regulation of skeletal muscle cell differentiation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasmic stress granule IDA
Inferred from Direct Assay
more info
PubMed 
located_in nuclear stress granule IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in trans-Golgi network IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
RNA binding protein fox-1 homolog 1
Names
RNA binding protein, fox-1 homolog 1
ataxin 2-binding protein 1
fox-1 homolog A
fox-1-like RNA-binding protein 1
hexaribonucleotide-binding protein 1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011881.2 RefSeqGene

    Range
    784273..2478589
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001142333.2NP_001135805.1  RNA binding protein fox-1 homolog 1 isoform 5

    See identical proteins and their annotated locations for NP_001135805.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (5) differs in the 5' UTR and has multiple coding region differences compared to variant 1. The resulting isoform (5) has a shorter and distinct N-terminus and other internal differences compared to isoform 1.
    Source sequence(s)
    AB208826, AC005774, AC009135, AF448859
    Consensus CDS
    CCDS55984.1
    UniProtKB/Swiss-Prot
    Q9NWB1
    UniProtKB/TrEMBL
    Q59HD3
    Related
    ENSP00000447753.1, ENST00000553186.5
    Conserved Domains (3) summary
    PRK03427
    Location:4122
    PRK03427; cell division protein ZipA; Provisional
    pfam12414
    Location:226315
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cd12407
    Location:117192
    RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
  2. NM_001142334.2NP_001135806.1  RNA binding protein fox-1 homolog 1 isoform 4

    See identical proteins and their annotated locations for NP_001135806.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (6) differs in the 5' UTR and lacks an in-frame section of the 3' coding region, compared to variant 1. This results in a shorter isoform (4) with an alternate N-terminus compared to isoform 1. Variants 4 and 6 both encode isoform 4.
    Source sequence(s)
    AC005774, AF107203, AK001027
    Consensus CDS
    CCDS55983.1
    UniProtKB/Swiss-Prot
    Q9NWB1
    Related
    ENSP00000447717.1, ENST00000547338.5
    Conserved Domains (3) summary
    PRK03427
    Location:4122
    PRK03427; cell division protein ZipA; Provisional
    pfam12414
    Location:253342
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cd12407
    Location:117192
    RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
  3. NM_001308117.1NP_001295046.1  RNA binding protein fox-1 homolog 1 isoform 6

    See identical proteins and their annotated locations for NP_001295046.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (7) differs in the UTRs and has multiple differences in the coding region which results in the use of an alternate start codon and a frameshift in the 3' coding region, compared to variant 1. The encoded isoform (6) has a longer N-terminus and has a distinct C-terminus, compared to isoform 1.
    Source sequence(s)
    AC005774, AC027683, AK293951
    Consensus CDS
    CCDS76818.1
    UniProtKB/TrEMBL
    B7Z1U7
    Related
    ENSP00000391269.4, ENST00000422070.8
    Conserved Domains (3) summary
    PRK03427
    Location:33165
    PRK03427; cell division protein ZipA; Provisional
    pfam12414
    Location:296385
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cd12407
    Location:160235
    RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
  4. NM_001364800.2NP_001351729.1  RNA binding protein fox-1 homolog 1 isoform 7

    Status: REVIEWED

    Source sequence(s)
    AC005774, AC007012, AC007217, AC009135, AC022206, AC027683, KF456152
    Conserved Domains (3) summary
    PRK03427
    Location:4122
    PRK03427; cell division protein ZipA; Provisional
    pfam12414
    Location:253339
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cd12407
    Location:117192
    RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
  5. NM_018723.4NP_061193.2  RNA binding protein fox-1 homolog 1 isoform 4

    See identical proteins and their annotated locations for NP_061193.2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (4) differs in the 5' UTR and lacks an in-frame section of the 3' coding region, compared to variant 1. This results in a shorter isoform (4) with an alternate N-terminus compared to isoform 1. Variants 4 and 6 both encode isoform 4.
    Source sequence(s)
    AB208826, AC005774, AC009135, AF107203
    Consensus CDS
    CCDS55983.1
    UniProtKB/Swiss-Prot
    Q9NWB1
    UniProtKB/TrEMBL
    Q59HD3
    Related
    ENSP00000450031.1, ENST00000550418.6
    Conserved Domains (3) summary
    PRK03427
    Location:4122
    PRK03427; cell division protein ZipA; Provisional
    pfam12414
    Location:253342
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cd12407
    Location:117192
    RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
  6. NM_145891.3NP_665898.1  RNA binding protein fox-1 homolog 1 isoform 1

    See identical proteins and their annotated locations for NP_665898.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1), also known as gamma, encodes isoform (1).
    Source sequence(s)
    AC005774, AF229057
    Consensus CDS
    CCDS10531.1
    UniProtKB/Swiss-Prot
    Q9NWB1
    Related
    ENSP00000309117.5, ENST00000311745.9
    Conserved Domains (3) summary
    TIGR01661
    Location:25208
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    pfam12414
    Location:273363
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cd12407
    Location:137212
    RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
  7. NM_145892.3NP_665899.1  RNA binding protein fox-1 homolog 1 isoform 2

    See identical proteins and their annotated locations for NP_665899.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2), also known as alpha, lacks an in-frame segment of the 3' coding region, compared to variant 1. This results in a shorter isoform (2) that lacks an internal segment, compared to isoform 1.
    Source sequence(s)
    AC005774, AF094849
    Consensus CDS
    CCDS45405.1
    UniProtKB/Swiss-Prot
    Q9NWB1
    Related
    ENSP00000402745.2, ENST00000436368.6
    Conserved Domains (3) summary
    TIGR01661
    Location:25208
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    pfam12414
    Location:273363
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cd12407
    Location:137212
    RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
  8. NM_145893.3NP_665900.1  RNA binding protein fox-1 homolog 1 isoform 3

    See identical proteins and their annotated locations for NP_665900.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3), also known as beta, has an alternate exon in the 3' coding region, compared to variant 1. This results in a shorter isoform (3) with an alternate C-terminus, compared to isoform 1.
    Source sequence(s)
    AC005774, AF109106
    Consensus CDS
    CCDS10532.1
    UniProtKB/Swiss-Prot
    Q9NWB1
    Related
    ENSP00000347855.4, ENST00000355637.9
    Conserved Domains (3) summary
    TIGR01661
    Location:25208
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    pfam12414
    Location:273360
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cd12407
    Location:137212
    RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    5239752..7713343
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017023318.2XP_016878807.1  RNA binding protein fox-1 homolog 1 isoform X1

    Related
    ENSP00000493041.1, ENST00000641259.1
  2. XM_024450303.1XP_024306071.1  RNA binding protein fox-1 homolog 1 isoform X2

    Conserved Domains (4) summary
    PHA03169
    Location:18156
    PHA03169; hypothetical protein; Provisional
    cd12407
    Location:303378
    RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
    pfam12414
    Location:439528
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cl27169
    Location:176308
    ZipA; ZipA C-terminal domain. ZipA, a membrane-anchored protein, is one of at least nine essential gene products necessary for assembly of the septal ring which mediates cell division in E.coli. ZipA and FtsA directly bind FtsZ, a homolog of eukaryotic ...
  3. XM_017023319.2XP_016878808.1  RNA binding protein fox-1 homolog 1 isoform X3

  4. XM_017023326.2XP_016878815.1  RNA binding protein fox-1 homolog 1 isoform X14

    Conserved Domains (3) summary
    PRK03427
    Location:4122
    PRK03427; cell division protein ZipA; Provisional
    pfam12414
    Location:253339
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cd12407
    Location:117192
    RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
  5. XM_005255390.4XP_005255447.1  RNA binding protein fox-1 homolog 1 isoform X13

    See identical proteins and their annotated locations for XP_005255447.1

    Conserved Domains (3) summary
    PRK03427
    Location:4122
    PRK03427; cell division protein ZipA; Provisional
    cd12407
    Location:117192
    RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
    pfam12414
    Location:253342
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
  6. XM_017023341.2XP_016878830.1  RNA binding protein fox-1 homolog 1 isoform X41

  7. XM_024450307.1XP_024306075.1  RNA binding protein fox-1 homolog 1 isoform X26

    Conserved Domains (3) summary
    pfam12414
    Location:222310
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cl17169
    Location:117156
    RRM_SF; RNA recognition motif (RRM) superfamily
    cl27169
    Location:4122
    ZipA; ZipA C-terminal domain. ZipA, a membrane-anchored protein, is one of at least nine essential gene products necessary for assembly of the septal ring which mediates cell division in E.coli. ZipA and FtsA directly bind FtsZ, a homolog of eukaryotic ...
  8. XM_024450316.1XP_024306084.1  RNA binding protein fox-1 homolog 1 isoform X42

    Conserved Domains (3) summary
    pfam12414
    Location:222310
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cl17169
    Location:117156
    RRM_SF; RNA recognition motif (RRM) superfamily
    cl27169
    Location:4122
    ZipA; ZipA C-terminal domain. ZipA, a membrane-anchored protein, is one of at least nine essential gene products necessary for assembly of the septal ring which mediates cell division in E.coli. ZipA and FtsA directly bind FtsZ, a homolog of eukaryotic ...
  9. XM_017023328.2XP_016878817.1  RNA binding protein fox-1 homolog 1 isoform X16

    Conserved Domains (3) summary
    PRK03427
    Location:33165
    PRK03427; cell division protein ZipA; Provisional
    cd12407
    Location:160235
    RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
    pfam12414
    Location:296384
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
  10. XM_017023324.2XP_016878813.1  RNA binding protein fox-1 homolog 1 isoform X10

    Conserved Domains (3) summary
    PRK03427
    Location:33165
    PRK03427; cell division protein ZipA; Provisional
    cd12407
    Location:160235
    RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
    pfam12414
    Location:296385
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
  11. XM_017023320.2XP_016878809.1  RNA binding protein fox-1 homolog 1 isoform X4

    Related
    ENSP00000446842.1, ENST00000547372.5
    Conserved Domains (4) summary
    PHA03193
    Location:88155
    PHA03193; tegument protein VP11/12; Provisional
    COG0724
    Location:143243
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12407
    Location:160235
    RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
    pfam12414
    Location:296383
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
  12. XM_024450309.1XP_024306077.1  RNA binding protein fox-1 homolog 1 isoform X29

    Conserved Domains (3) summary
    PRK03427
    Location:33165
    PRK03427; cell division protein ZipA; Provisional
    cd12407
    Location:160235
    RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
    pfam12414
    Location:269357
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
  13. XM_017023329.2XP_016878818.1  RNA binding protein fox-1 homolog 1 isoform X18

    Conserved Domains (3) summary
    PRK03427
    Location:33165
    PRK03427; cell division protein ZipA; Provisional
    cd12407
    Location:160235
    RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
    pfam12414
    Location:269358
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
  14. XM_024450310.1XP_024306078.1  RNA binding protein fox-1 homolog 1 isoform X30

    Conserved Domains (3) summary
    pfam12414
    Location:265353
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cl17169
    Location:160199
    RRM_SF; RNA recognition motif (RRM) superfamily
    cl27169
    Location:33165
    ZipA; ZipA C-terminal domain. ZipA, a membrane-anchored protein, is one of at least nine essential gene products necessary for assembly of the septal ring which mediates cell division in E.coli. ZipA and FtsA directly bind FtsZ, a homolog of eukaryotic ...
  15. XM_024450314.1XP_024306082.1  RNA binding protein fox-1 homolog 1 isoform X38

    Conserved Domains (3) summary
    pfam12414
    Location:238327
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cl17169
    Location:160199
    RRM_SF; RNA recognition motif (RRM) superfamily
    cl27169
    Location:33165
    ZipA; ZipA C-terminal domain. ZipA, a membrane-anchored protein, is one of at least nine essential gene products necessary for assembly of the septal ring which mediates cell division in E.coli. ZipA and FtsA directly bind FtsZ, a homolog of eukaryotic ...
  16. XM_017023322.2XP_016878811.1  RNA binding protein fox-1 homolog 1 isoform X6

    Related
    ENSP00000438768.2, ENST00000535565.6
    Conserved Domains (3) summary
    PRK03427
    Location:26158
    PRK03427; cell division protein ZipA; Provisional
    pfam12414
    Location:289375
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cd12407
    Location:153228
    RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
  17. XM_017023321.2XP_016878810.1  RNA binding protein fox-1 homolog 1 isoform X5

    Conserved Domains (3) summary
    PRK03427
    Location:26158
    PRK03427; cell division protein ZipA; Provisional
    cd12407
    Location:153228
    RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
    pfam12414
    Location:289378
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
  18. XM_017023330.1XP_016878819.1  RNA binding protein fox-1 homolog 1 isoform X20

    Related
    ENSP00000448496.1, ENST00000552089.5
  19. XM_024450304.1XP_024306072.1  RNA binding protein fox-1 homolog 1 isoform X11

    Conserved Domains (3) summary
    cd12407
    Location:153228
    RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
    pfam12414
    Location:289378
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cl27169
    Location:26158
    ZipA; ZipA C-terminal domain. ZipA, a membrane-anchored protein, is one of at least nine essential gene products necessary for assembly of the septal ring which mediates cell division in E.coli. ZipA and FtsA directly bind FtsZ, a homolog of eukaryotic ...
  20. XM_024450305.1XP_024306073.1  RNA binding protein fox-1 homolog 1 isoform X12

    Conserved Domains (3) summary
    cd12407
    Location:153228
    RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
    pfam12414
    Location:262350
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cl27169
    Location:26158
    ZipA; ZipA C-terminal domain. ZipA, a membrane-anchored protein, is one of at least nine essential gene products necessary for assembly of the septal ring which mediates cell division in E.coli. ZipA and FtsA directly bind FtsZ, a homolog of eukaryotic ...
  21. XM_024450311.1XP_024306079.1  RNA binding protein fox-1 homolog 1 isoform X31

    Conserved Domains (3) summary
    cd12407
    Location:153228
    RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
    pfam12414
    Location:262350
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cl27169
    Location:26158
    ZipA; ZipA C-terminal domain. ZipA, a membrane-anchored protein, is one of at least nine essential gene products necessary for assembly of the septal ring which mediates cell division in E.coli. ZipA and FtsA directly bind FtsZ, a homolog of eukaryotic ...
  22. XM_024450312.1XP_024306080.1  RNA binding protein fox-1 homolog 1 isoform X32

    Conserved Domains (3) summary
    pfam12414
    Location:258346
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cl17169
    Location:153192
    RRM_SF; RNA recognition motif (RRM) superfamily
    cl27169
    Location:26158
    ZipA; ZipA C-terminal domain. ZipA, a membrane-anchored protein, is one of at least nine essential gene products necessary for assembly of the septal ring which mediates cell division in E.coli. ZipA and FtsA directly bind FtsZ, a homolog of eukaryotic ...
  23. XM_024450313.1XP_024306081.1  RNA binding protein fox-1 homolog 1 isoform X33

    Conserved Domains (3) summary
    pfam12414
    Location:231320
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cl17169
    Location:153192
    RRM_SF; RNA recognition motif (RRM) superfamily
    cl27169
    Location:26158
    ZipA; ZipA C-terminal domain. ZipA, a membrane-anchored protein, is one of at least nine essential gene products necessary for assembly of the septal ring which mediates cell division in E.coli. ZipA and FtsA directly bind FtsZ, a homolog of eukaryotic ...
  24. XM_017023336.1XP_016878825.1  RNA binding protein fox-1 homolog 1 isoform X34

    Related
    ENSP00000502616.1, ENST00000675459.1
    Conserved Domains (3) summary
    PRK03427
    Location:4122
    PRK03427; cell division protein ZipA; Provisional
    pfam12414
    Location:253339
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cd12407
    Location:117192
    RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
  25. XM_017023333.1XP_016878822.1  RNA binding protein fox-1 homolog 1 isoform X23

    UniProtKB/Swiss-Prot
    Q9NWB1
    Related
    ENSP00000502718.1, ENST00000675653.1
    Conserved Domains (3) summary
    PRK03427
    Location:4122
    PRK03427; cell division protein ZipA; Provisional
    pfam12414
    Location:253342
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cd12407
    Location:117192
    RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
  26. XM_005255391.4XP_005255448.1  RNA binding protein fox-1 homolog 1 isoform X13

    See identical proteins and their annotated locations for XP_005255448.1

    Conserved Domains (3) summary
    PRK03427
    Location:4122
    PRK03427; cell division protein ZipA; Provisional
    cd12407
    Location:117192
    RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
    pfam12414
    Location:253342
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
  27. XM_017023342.1XP_016878831.1  RNA binding protein fox-1 homolog 1 isoform X41

  28. XM_017023338.1XP_016878827.1  RNA binding protein fox-1 homolog 1 isoform X36

    UniProtKB/Swiss-Prot
    Q9NWB1
    Conserved Domains (3) summary
    PRK03427
    Location:4122
    PRK03427; cell division protein ZipA; Provisional
    pfam12414
    Location:226315
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cd12407
    Location:117192
    RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
  29. XM_017023340.1XP_016878829.1  RNA binding protein fox-1 homolog 1 isoform X39

  30. XM_017023323.2XP_016878812.1  RNA binding protein fox-1 homolog 1 isoform X8

  31. XM_017023332.1XP_016878821.1  RNA binding protein fox-1 homolog 1 isoform X22

    Related
    ENSP00000501878.1, ENST00000675562.1
  32. XM_017023327.1XP_016878816.1  RNA binding protein fox-1 homolog 1 isoform X15

  33. XM_005255386.4XP_005255443.1  RNA binding protein fox-1 homolog 1 isoform X7

    Conserved Domains (4) summary
    PHA03193
    Location:70137
    PHA03193; tegument protein VP11/12; Provisional
    COG0724
    Location:125225
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12407
    Location:142217
    RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
    pfam12414
    Location:278365
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
  34. XM_017023337.1XP_016878826.1  RNA binding protein fox-1 homolog 1 isoform X35

  35. XM_017023334.1XP_016878823.1  RNA binding protein fox-1 homolog 1 isoform X24

  36. XM_024450308.1XP_024306076.1  RNA binding protein fox-1 homolog 1 isoform X28

    Conserved Domains (3) summary
    pfam12414
    Location:247336
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cl17169
    Location:142181
    RRM_SF; RNA recognition motif (RRM) superfamily
    cl26247
    Location:38192
    DNA_pol3_delta2; DNA polymerase III, delta subunit
  37. XM_011522547.2XP_011520849.1  RNA binding protein fox-1 homolog 1 isoform X25

    See identical proteins and their annotated locations for XP_011520849.1

    UniProtKB/TrEMBL
    X5D7T5
    Related
    ENSP00000507562.1, ENST00000683326.1
    Conserved Domains (3) summary
    TIGR01661
    Location:25208
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    pfam12414
    Location:273359
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cd12407
    Location:137212
    RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
  38. XM_011522546.2XP_011520848.1  RNA binding protein fox-1 homolog 1 isoform X17

    See identical proteins and their annotated locations for XP_011520848.1

    UniProtKB/TrEMBL
    X5DNY3
    Related
    ENSP00000344196.4, ENST00000340209.8
    Conserved Domains (3) summary
    TIGR01661
    Location:25208
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    pfam12414
    Location:273362
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cd12407
    Location:137212
    RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
  39. XM_005255387.4XP_005255444.1  RNA binding protein fox-1 homolog 1 isoform X9

    See identical proteins and their annotated locations for XP_005255444.1

    Conserved Domains (3) summary
    TIGR01661
    Location:25208
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    pfam12414
    Location:273360
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cd12407
    Location:137212
    RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
  40. XM_011522548.2XP_011520850.1  RNA binding protein fox-1 homolog 1 isoform X37

    See identical proteins and their annotated locations for XP_011520850.1

    UniProtKB/TrEMBL
    X5DP44
    Related
    ENSP00000507921.1, ENST00000682918.1
    Conserved Domains (3) summary
    cd12407
    Location:137212
    RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
    pfam12414
    Location:246334
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cl25887
    Location:25208
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
  41. XM_005255394.4XP_005255451.1  RNA binding protein fox-1 homolog 1 isoform X27

    See identical proteins and their annotated locations for XP_005255451.1

    Conserved Domains (3) summary
    cd12407
    Location:137212
    RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
    TIGR01661
    Location:25208
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    pfam12414
    Location:246336
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
  42. XM_024450306.1XP_024306074.1  RNA binding protein fox-1 homolog 1 isoform X19

    Conserved Domains (3) summary
    PRK14971
    Location:19187
    PRK14971; DNA polymerase III subunit gamma/tau
    pfam12414
    Location:242331
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cl17169
    Location:137176
    RRM_SF; RNA recognition motif (RRM) superfamily
  43. XM_017023331.2XP_016878820.1  RNA binding protein fox-1 homolog 1 isoform X21

    Conserved Domains (4) summary
    PHA03193
    Location:2592
    PHA03193; tegument protein VP11/12; Provisional
    COG0724
    Location:80180
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12407
    Location:97172
    RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
    pfam12414
    Location:233320
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
  44. XM_024450315.1XP_024306083.1  RNA binding protein fox-1 homolog 1 isoform X40

    Related
    ENSP00000502682.1, ENST00000674792.1
    Conserved Domains (3) summary
    PRK03427
    Location:4102
    PRK03427; cell division protein ZipA; Provisional
    pfam12414
    Location:233319
    Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    cd12407
    Location:97172
    RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
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