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SPAG9 sperm associated antigen 9 [ Bos taurus (domestic cattle) ]

Gene ID: 540689, updated on 17-Aug-2024

Summary

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Official Symbol
SPAG9provided by VGNC
Official Full Name
sperm associated antigen 9provided by VGNC
Primary source
VGNC:VGNC:35170
See related
Ensembl:ENSBTAG00000012293
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
32
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (35645163..35797188)

Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene diphthamide biosynthesis protein 3-like Neighboring gene mitotic-spindle organizing protein 1-like Neighboring gene small nucleolar RNA SNORD86 Neighboring gene group XIIA secretory phospholipase A2-like Neighboring gene transducer of ERBB2, 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables JUN kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables MAP-kinase scaffold activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables kinesin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor complex adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-Jun-amino-terminal kinase-interacting protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076925.1 → NP_001070393.1  C-Jun-amino-terminal kinase-interacting protein 4

    See identical proteins and their annotated locations for NP_001070393.1

    Status: PROVISIONAL

    Source sequence(s)
    BC123734
    UniProtKB/TrEMBL
    F1MZ69, Q08DI3
    Related
    ENSBTAP00000075816.1, ENSBTAT00000099456.1
    Conserved Domains (1) summary
    pfam16471
    Location:249 → 301
    JIP_LZII; JNK-interacting protein leucine zipper II

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    35645163..35797188
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005220611.5 → XP_005220668.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1LP94, A0A3Q1NAH5
    Related
    ENSBTAP00000068271.1, ENSBTAT00000076201.2
    Conserved Domains (2) summary
    pfam09744
    Location:25 → 178
    Jnk-SapK_ap_N; JNK_SAPK-associated protein-1
    pfam16471
    Location:392 → 444
    JIP_LZII; JNK-interacting protein leucine zipper II

  2. XM_005220615.5 → XP_005220672.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1LP94
    Related
    ENSBTAP00000061887.2, ENSBTAT00000077092.2
    Conserved Domains (2) summary
    pfam09744
    Location:25 → 178
    Jnk-SapK_ap_N; JNK_SAPK-associated protein-1
    pfam16471
    Location:392 → 444
    JIP_LZII; JNK-interacting protein leucine zipper II

  3. XM_024980368.2 → XP_024836136.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A3Q1LP94
    Conserved Domains (3) summary
    pfam09744
    Location:25 → 178
    Jnk-SapK_ap_N; JNK_SAPK-associated protein-1
    pfam16471
    Location:392 → 444
    JIP_LZII; JNK-interacting protein leucine zipper II
    cl27170
    Location:90 → 332
    DUF460; Protein of unknown function (DUF460)

  4. XM_024980370.2 → XP_024836138.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X5

    UniProtKB/TrEMBL
    A0A3Q1LP94
    Conserved Domains (3) summary
    pfam09744
    Location:25 → 178
    Jnk-SapK_ap_N; JNK_SAPK-associated protein-1
    pfam16471
    Location:392 → 444
    JIP_LZII; JNK-interacting protein leucine zipper II
    cl27170
    Location:90 → 332
    DUF460; Protein of unknown function (DUF460)

  5. XM_024980369.2 → XP_024836137.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X4

    UniProtKB/TrEMBL
    A0A3Q1LP94
    Conserved Domains (3) summary
    pfam09744
    Location:25 → 178
    Jnk-SapK_ap_N; JNK_SAPK-associated protein-1
    pfam16471
    Location:392 → 444
    JIP_LZII; JNK-interacting protein leucine zipper II
    cl27170
    Location:90 → 332
    DUF460; Protein of unknown function (DUF460)

  6. XM_024980371.2 → XP_024836139.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X7

    UniProtKB/TrEMBL
    F1MZ69
    Conserved Domains (1) summary
    pfam16471
    Location:204 → 256
    JIP_LZII; JNK-interacting protein leucine zipper II

  7. XM_024980372.2 → XP_024836140.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X7

    UniProtKB/TrEMBL
    F1MZ69
    Conserved Domains (1) summary
    pfam16471
    Location:204 → 256
    JIP_LZII; JNK-interacting protein leucine zipper II

  8. XM_005220620.5 → XP_005220677.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X6

    UniProtKB/TrEMBL
    F1MZ69
    Conserved Domains (1) summary
    pfam16471
    Location:249 → 301
    JIP_LZII; JNK-interacting protein leucine zipper II

RNA

  1. XR_009491559.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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