Format

Send to:

Choose Destination

PMCHL1 pro-melanin concentrating hormone like 1 (pseudogene) [ Homo sapiens (human) ]

Gene ID: 5369, updated on 21-Dec-2019

Summary

Official Symbol
PMCHL1provided by HGNC
Official Full Name
pro-melanin concentrating hormone like 1 (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:9110
See related
Ensembl:ENSG00000168967 MIM:176793
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more

Genomic context

See PMCHL1 in Genome Data Viewer
Location:
5p14.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (22142352..22152272)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (22142461..22152381)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene cadherin 12 Neighboring gene small nucleolar RNA, H/ACA box 105A Neighboring gene heat shock protein family D (Hsp60) member 1 pseudogene 1 Neighboring gene uncharacterized LOC107986345 Neighboring gene uncharacterized LOC105374682 Neighboring gene uncharacterized LOC105374681 Neighboring gene glucosaminyl (N-acetyl) transferase 1, core 2 pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003921.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AY008409
    Related
    ENST00000430902.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

    Range
    22142352..22152272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_031887.2: Suppressed sequence

    Description
    NM_031887.2: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate. All of the transcripts associated with this gene are NMD candidates, and it may be that this gene does not encode a
Support Center