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Nit2 nitrilase family, member 2 [ Mus musculus (house mouse) ]

Gene ID: 52633, updated on 31-Jan-2019

Summary

Official Symbol
Nit2provided by MGI
Official Full Name
nitrilase family, member 2provided by MGI
Primary source
MGI:MGI:1261838
See related
Ensembl:ENSMUSG00000022751
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
D16Ertd502e; 1190017B19Rik
Expression
Broad expression in liver adult (RPKM 44.0), kidney adult (RPKM 21.9) and 25 other tissues See more
Orthologs

Genomic context

See Nit2 in Genome Data Viewer
Location:
16 C1.1; 16 34.22 cM
Exon count:
10
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 16 NC_000082.6 (57156665..57167332, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (57156778..57167445, complement)

Chromosome 16 - NC_000082.6Genomic Context describing neighboring genes Neighboring gene transmembrane protein 45A2 Neighboring gene translocase of outer mitochondrial membrane 70A Neighboring gene TBC1 domain family, member 23 Neighboring gene transmembrane protein 30C Neighboring gene predicted gene, 26800

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
omega-amidase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
omega-amidase activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
asparagine metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
asparagine metabolic process ISO
Inferred from Sequence Orthology
more info
 
glutamine metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
glutamine metabolic process ISO
Inferred from Sequence Orthology
more info
 
nitrogen compound metabolic process IEA
Inferred from Electronic Annotation
more info
 
oxaloacetate metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
oxaloacetate metabolic process ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
centrosome ISO
Inferred from Sequence Orthology
more info
 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytosol ISO
Inferred from Sequence Orthology
more info
 
mitochondrion HDA PubMed 

General protein information

Preferred Names
omega-amidase NIT2
Names
Nit protein 2
nitrilase homolog 2
NP_075664.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_023175.1NP_075664.1  omega-amidase NIT2

    See identical proteins and their annotated locations for NP_075664.1

    Status: PROVISIONAL

    Source sequence(s)
    AF284573
    Consensus CDS
    CCDS37363.1
    UniProtKB/Swiss-Prot
    Q9JHW2
    Related
    ENSMUSP00000023432.8, ENSMUST00000023432.9
    Conserved Domains (1) summary
    cd07572
    Location:5265
    nit; Nit1, Nit 2, and related proteins, and the Nit1-like domain of NitFhit (class 10 nitrilases)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000082.6 Reference GRCm38.p4 C57BL/6J

    Range
    57156665..57167332 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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