Format

Send to:

Choose Destination

FAM8A1 family with sequence similarity 8 member A1 [ Homo sapiens (human) ]

Gene ID: 51439, updated on 21-Dec-2019

Summary

Official Symbol
FAM8A1provided by HGNC
Official Full Name
family with sequence similarity 8 member A1provided by HGNC
Primary source
HGNC:HGNC:16372
See related
Ensembl:ENSG00000137414 MIM:618409
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
AHCP
Expression
Ubiquitous expression in liver (RPKM 21.6), endometrium (RPKM 17.3) and 25 other tissues See more
Orthologs

Genomic context

See FAM8A1 in Genome Data Viewer
Location:
6p22.3
Exon count:
5
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 6 NC_000006.12 (17600302..17611715)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (17600518..17611950)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102724591 Neighboring gene SUMO2 pseudogene 13 Neighboring gene RNA, U6 small nuclear 190, pseudogene Neighboring gene nucleoporin 153 Neighboring gene uncharacterized LOC105374952

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ23721

Gene Ontology Provided by GOA

Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
protein FAM8A1
Names
Autosomal Highly Conserved Protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_016255.3NP_057339.1  protein FAM8A1

    See identical proteins and their annotated locations for NP_057339.1

    Status: VALIDATED

    Source sequence(s)
    AF097027, AL138824, BC047881, BQ015864, DA333190
    Consensus CDS
    CCDS4540.1
    UniProtKB/Swiss-Prot
    Q9UBU6
    UniProtKB/TrEMBL
    A0A024R006
    Related
    ENSP00000259963.3, ENST00000259963.4
    Conserved Domains (2) summary
    pfam06271
    Location:244403
    RDD; RDD family
    cl26464
    Location:5233
    Atrophin-1; Atrophin-1 family

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p13 Primary Assembly

    Range
    17600302..17611715
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center