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ACSF3 acyl-CoA synthetase family member 3 [ Bos taurus (cattle) ]

Gene ID: 509209, updated on 5-Mar-2024

Summary

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Official Symbol
ACSF3provided by VGNC
Official Full Name
acyl-CoA synthetase family member 3provided by VGNC
Primary source
VGNC:VGNC:25563
See related
BGD:BT26283; Ensembl:ENSBTAG00000015968
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (14204014..14248437)

Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene PABPN1 like, cytoplasmic Neighboring gene CBFA2/RUNX1 partner transcriptional co-repressor 3 Neighboring gene uncharacterized LOC132342793 Neighboring gene cadherin 15 Neighboring gene solute carrier family 22 member 31

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC127850

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables medium-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
malonate--CoA ligase ACSF3, mitochondrial
Names
acyl-CoA synthetase family member 3, mitochondrial
NP_001030240.1
XP_005218566.1
XP_010812746.1
XP_010812747.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001035068.2 → NP_001030240.1  malonate--CoA ligase ACSF3, mitochondrial precursor

    See identical proteins and their annotated locations for NP_001030240.1

    Status: PROVISIONAL

    Source sequence(s)
    BC102586
    UniProtKB/Swiss-Prot
    Q58DN7
    UniProtKB/TrEMBL
    A0A3Q1LS82
    Related
    ENSBTAP00000021234.4, ENSBTAT00000021234.5
    Conserved Domains (1) summary
    cd05941
    Location:56 → 571
    MCS; Malonyl-CoA synthetase (MCS)

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    14204014..14248437
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005218509.5 → XP_005218566.1  malonate--CoA ligase ACSF3, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_005218566.1

    UniProtKB/Swiss-Prot
    Q58DN7
    UniProtKB/TrEMBL
    A0A3Q1LS82
    Related
    ENSBTAP00000060268.2, ENSBTAT00000067054.2
    Conserved Domains (1) summary
    cd05941
    Location:56 → 571
    MCS; Malonyl-CoA synthetase (MCS)

  2. XM_010814445.4 → XP_010812747.1  malonate--CoA ligase ACSF3, mitochondrial isoform X2

    See identical proteins and their annotated locations for XP_010812747.1

    Conserved Domains (1) summary
    cl17068
    Location:1 → 300
    AFD_class_I; Adenylate forming domain, Class I superfamily

  3. XM_010814444.4 → XP_010812746.1  malonate--CoA ligase ACSF3, mitochondrial isoform X2

    See identical proteins and their annotated locations for XP_010812746.1

    Conserved Domains (1) summary
    cl17068
    Location:1 → 300
    AFD_class_I; Adenylate forming domain, Class I superfamily
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q58DN7.1 GenPept UniProtKB/Swiss-Prot:Q58DN7

Gene LinkOut

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