U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Glipr1l1 GLIPR1 like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 503139, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
Glipr1l1provided by RGD
Official Full Name
GLIPR1 like 1provided by RGD
Primary source
RGD:1563000
See related
EnsemblRapid:ENSRNOG00000026634 AllianceGenome:RGD:1563000
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1563000
Summary
Predicted to be involved in binding activity of sperm to zona pellucida. Predicted to be located in acrosomal vesicle and sperm connecting piece. Predicted to be active in extracellular space. Orthologous to human GLIPR1L1 (GLIPR1 like 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward (RPKM 160.9) See more
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Glipr1l1 in Genome Data Viewer
Location:
7q22
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (49436867..49463860, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (47550637..47577611, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (54828576..54855556, complement)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene KRR1, small subunit processome component homolog Neighboring gene GLI pathogenesis-related 1 Neighboring gene GLIPR1 like 2 Neighboring gene calcyphosine 2 Neighboring gene ribosomal protein L27a, pseudogene 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Glioma pathogenesis-related 1-like 1 is testis enriched, dynamically modified, and redistributed during male germ cell maturation and has a potential role in sperm-oocyte binding. Gibbs GM, et al. Endocrinology, 2010 May. PMID 20219979
  2. Regulation of IL-1 gene expression: differential responsiveness of murine macrophage lines. Godambe SA, et al. Cytokine, 1993 Jul. PMID 8260598
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables molecular adaptor activity ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within binding of sperm to zona pellucida ISO
Inferred from Sequence Orthology
more info
  
involved_in fusion of sperm to egg plasma membrane involved in single fertilization ISO
Inferred from Sequence Orthology
more info
  
involved_in protein localization involved in acrosome reaction ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
located_in acrosomal vesicle ISO
Inferred from Sequence Orthology
more info
  
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in outer acrosomal membrane ISO
Inferred from Sequence Orthology
more info
  
part_of protein complex involved in cell-cell adhesion ISO
Inferred from Sequence Orthology
more info
  
located_in sperm head-tail coupling apparatus ISO
Inferred from Sequence Orthology
more info
  

General protein information

Go to the top of the page Help
Preferred Names
GLIPR1 like 1; GLIPR1-like protein 1
Names
GLI pathogenesis-related 1 like 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001432016.1 → NP_001418945.1  GLIPR1 like 1 precursor

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000007

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    49436867..49463860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002729790.6 → XP_002729836.2  GLIPR1-like protein 1

    UniProtKB/TrEMBL
    D3ZI91
    Related
    ENSRNOP00000032951.4, ENSRNOT00000039475.6
    Conserved Domains (1) summary
    cl00133
    Location:40 → 182
    CAP; CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Chemical Information
Molecular Biology Databases
Research Materials
Tools