U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

aglA alpha-galactosidase aglA-Aspergillus niger [ Aspergillus niger ]

Gene ID: 4981013, updated on 17-May-2024

Summary

Go to the top of the page Help
Gene symbol
aglA
Gene description
alpha-galactosidase aglA-Aspergillus niger
Locus tag
An06g00170
See related
FungiDB:An06g00170; VEuPathDB:An06g00170
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus niger
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: VIII, map: unlocalized, clone: An06
Exon count:
1

NT_166522.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene hypothetical protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NT_166522.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha-galactosidase aglA-Aspergillus niger
XP_001390845.1
  • Function: Hydrolysis of terminal, non-reducing alpha-D-galactose residues in alpha-D-galactosides,including galactose oligosaccharides, galactomannans and galactolipids.;
    Gene-ID: aglA;
    Mapping: aglA from A. niger is mapped to chromosome VIII (LG VIII); see list from DSM, PUBMED 8041364.;
    Remark: This ORF has some differences in its nucleotide sequence compared to aglA from the databanks resulting in some aa exchanges.;
    Remark: This ORF is N-terminally 8 aa shorter than aglA from the databanks.;
    Remark: in the SWISSPROT entry P56526 the alpha-glucosidases aglU from A. niger is also wrongly termed as aglA.;
    See PMID 1320186

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_166522.1 Reference assembly

    Range
    38658..40271
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001390808.1 → XP_001390845.1  alpha-galactosidase aglA-Aspergillus niger [Aspergillus niger]

    See identical proteins and their annotated locations for XP_001390845.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A2QL72
    UniProtKB/TrEMBL
    A0A318ZYJ3, A0A370BUQ1, A0A9W6E923
    Conserved Domains (3) summary
    cd14792
    Location:34 → 319
    GH27; glycosyl hydrolase family 27 (GH27)
    pfam00652
    Location:418 → 528
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    cl26513
    Location:272 → 461
    PLN02692; alpha-galactosidase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials