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rsrc2 arginine/serine-rich coiled-coil 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 496445, updated on 17-Aug-2024

Summary

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Official Symbol
rsrc2provided by Xenbase
Official Full Name
arginine/serine-rich coiled-coil 2provided by Xenbase
Primary source
Xenbase:XB-GENE-977411
See related
Ensembl:ENSXETG00000007798
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (161690813..161706208)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (153058309..153073713)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene hydroxycarboxylic acid receptor 2 Neighboring gene kinetochore associated 1 Neighboring gene zinc finger CCHC-type containing 8 Neighboring gene CAP-Gly domain containing linker protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
arginine/serine-rich coiled-coil protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001011036.1 → NP_001011036.1  arginine/serine-rich coiled-coil protein 2

    See identical proteins and their annotated locations for NP_001011036.1

    Status: PROVISIONAL

    Source sequence(s)
    BC084062
    UniProtKB/Swiss-Prot
    Q5XHJ5
    UniProtKB/TrEMBL
    A0A6I8SKK9
    Related
    ENSXETP00000098007.2, ENSXETT00000076415.2
    Conserved Domains (2) summary
    TIGR01642
    Location:37 → 112
    U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
    pfam15477
    Location:329 → 398
    SMAP; Small acidic protein family

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    161690813..161706208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012960614.3 → XP_012816068.1  arginine/serine-rich coiled-coil protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A6I8SKK9, A0A8J0SHQ9
    Conserved Domains (1) summary
    pfam15477
    Location:326 → 395
    SMAP; Small acidic protein family

  2. XM_012960619.3 → XP_012816073.1  arginine/serine-rich coiled-coil protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A6I8SKK9, A0A8J0SB23
    Conserved Domains (2) summary
    TIGR01642
    Location:37 → 112
    U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
    pfam15477
    Location:325 → 394
    SMAP; Small acidic protein family

  3. XM_012960627.3 → XP_012816081.1  arginine/serine-rich coiled-coil protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A6I8SWM7, A0A8J0SJD6
    Conserved Domains (1) summary
    pfam15477
    Location:272 → 341
    SMAP; Small acidic protein family

  4. XM_012960622.3 → XP_012816076.1  arginine/serine-rich coiled-coil protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A6I8SWM7, A0A8J0SKM5
    Related
    ENSXETP00000097763.1, ENSXETT00000089756.2
    Conserved Domains (1) summary
    pfam15477
    Location:283 → 352
    SMAP; Small acidic protein family
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5XHJ5.1 GenPept UniProtKB/Swiss-Prot:Q5XHJ5

Gene LinkOut

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