uchl3.L ubiquitin C-terminal hydrolase L3 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: uchl3.L
Official Full Name: ubiquitin C-terminal hydrolase L3 L homeolog
Primary source: Xenbase:XB-GENE-980865
Locus tag: XELAEV_18013195mg
See related: EnsemblRapid:ENSXLAG00005000507
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: uchl3
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Genomic context

Location:: chromosome: 2L

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2L	NC_054373.1 (132261366..132299398, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2L	NC_030726.1 (126383798..126422049, complement)

Chromosome 2L - NC_054373.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables cysteine-type deubiquitinase activity	IEA Inferred from Electronic Annotation more info
enables cysteine-type peptidase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within protein deubiquitination	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within proteolysis	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within ubiquitin-dependent protein catabolic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: ubiquitin C-terminal hydrolase L3 L homeolog

Names: ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)

NP_001088200.1

EC 3.4.19.12

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001094731.1 → NP_001088200.1 ubiquitin C-terminal hydrolase L3 L homeolog

See identical proteins and their annotated locations for NP_001088200.1

Status: PROVISIONAL

Source sequence(s)

BC084116

UniProtKB/TrEMBL

A0A974HYX5, Q5XHE2

Related

ENSXLAP00005001424.1, ENSXLAT00005001464.1

Conserved Domains (1) summary

cd09616
Location:6 → 227

Peptidase_C12_UCH_L1_L3; Cysteine peptidase C12 containing ubiquitin carboxyl-terminal hydrolase (UCH) families L1 and L3

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

132261366..132299398 complement

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GenBank, FASTA, Sequence Viewer (Graphics)