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haus5 HAUS augmin-like complex, subunit 5 [ Danio rerio (zebrafish) ]

Gene ID: 492797, updated on 12-Sep-2024

Summary

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Official Symbol
haus5provided by ZNC
Official Full Name
HAUS augmin-like complex, subunit 5provided by ZNC
Primary source
ZFIN:ZDB-GENE-041114-150
See related
Ensembl:ENSDARG00000019156 AllianceGenome:ZFIN:ZDB-GENE-041114-150
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:101661
Summary
Predicted to be involved in centrosome cycle and spindle assembly. Predicted to be part of HAUS complex. Predicted to be active in centrosome. Is expressed in brain. Orthologous to human HAUS5 (HAUS augmin like complex subunit 5). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (20897852..20914743, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (20865767..20882658, complement)

Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene fizzy/cell division cycle 20 related 1a Neighboring gene si:ch73-196i15.3 Neighboring gene si:ch73-196i15.5 Neighboring gene si:dkeyp-82a1.1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Gene responses in the central nervous system of zebrafish embryos exposed to the neurotoxicant methyl mercury. Ho NY, et al. Environ Sci Technol, 2013 Apr 2. PMID 23458150
  2. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in centrosome cycle IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within centrosome cycle IEA
Inferred from Electronic Annotation
more info
  
involved_in spindle assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within spindle assembly IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of HAUS complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of HAUS complex IEA
Inferred from Electronic Annotation
more info
  
is_active_in centrosome IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
HAUS augmin-like complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001007438.1 → NP_001007439.1  HAUS augmin-like complex subunit 5

    See identical proteins and their annotated locations for NP_001007439.1

    Status: PROVISIONAL

    Source sequence(s)
    BC085405
    UniProtKB/TrEMBL
    Q5U3T1
    Related
    ENSDARP00000017340.6, ENSDART00000025356.7
    Conserved Domains (2) summary
    pfam14817
    Location:6 → 632
    HAUS5; HAUS augmin-like complex subunit 5
    cl21453
    Location:500 → 568
    PKc_like; Protein Kinases, catalytic domain

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007119.7 Reference GRCz11 Primary Assembly

    Range
    20897852..20914743 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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