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LRR1 leucine rich repeat protein 1 [ Canis lupus familiaris (dog) ]

Gene ID: 490676, updated on 5-Mar-2024

Summary

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Official Symbol
LRR1provided by VGNC
Official Full Name
leucine rich repeat protein 1provided by VGNC
Primary source
VGNC:VGNC:42782
See related
Ensembl:ENSCAFG00845002248
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
PPIL5
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (26407620..26419912)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (25983543..25995818)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (26453770..26466044)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (26063012..26075286)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (26136640..26148911)

Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S29 Neighboring gene RNA, 7SL, cytoplasmic 1 Neighboring gene ribosomal protein L36a like Neighboring gene alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peptidylprolyl isomerase-like 5; leucine-rich repeat protein 1
Names
peptidylprolyl isomerase (cyclophilin)-like 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051812.1 Reference ROS_Cfam_1.0

    Range
    26407620..26419912
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038673556.1 → XP_038529484.1  leucine-rich repeat protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0LBN6, A0A8I3MNX5, A0A8P0PLL8
    Related
    ENSCAFP00845003149.1, ENSCAFT00845003948.1

  2. XM_038673555.1 → XP_038529483.1  leucine-rich repeat protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0L8U2
    Conserved Domains (2) summary
    COG4886
    Location:149 → 352
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:164 → 186
    LRR_RI; leucine-rich repeat [structural motif]

  3. XM_038673551.1 → XP_038529479.1  leucine-rich repeat protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LXF9, A0A8I3MMG7, A0A8P0NSQ0
    Related
    ENSCAFP00845003145.1, ENSCAFT00845003944.1
    Conserved Domains (2) summary
    COG4886
    Location:155 → 342
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:164 → 186
    LRR_RI; leucine-rich repeat [structural motif]

  4. XM_038673553.1 → XP_038529481.1  leucine-rich repeat protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MMG7, A0A8P0NSQ0
    Conserved Domains (2) summary
    COG4886
    Location:114 → 301
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:123 → 145
    LRR_RI; leucine-rich repeat [structural motif]

  5. XM_038673552.1 → XP_038529480.1  leucine-rich repeat protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MMG7, A0A8P0NSQ0
    Conserved Domains (2) summary
    COG4886
    Location:114 → 301
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:123 → 145
    LRR_RI; leucine-rich repeat [structural motif]

  6. XM_038673554.1 → XP_038529482.1  leucine-rich repeat protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MMG7, A0A8P0NSQ0
    Conserved Domains (2) summary
    COG4886
    Location:114 → 301
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:123 → 145
    LRR_RI; leucine-rich repeat [structural motif]

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049268.1 Alternate UMICH_Zoey_3.1

    Range
    26063012..26075286
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038483201.1 → XP_038339129.1  leucine-rich repeat protein 1 isoform X4

  2. XM_038483200.1 → XP_038339128.1  leucine-rich repeat protein 1 isoform X3

    Conserved Domains (2) summary
    COG4886
    Location:149 → 352
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:164 → 186
    LRR_RI; leucine-rich repeat [structural motif]

  3. XM_038483196.1 → XP_038339124.1  leucine-rich repeat protein 1 isoform X1

    Conserved Domains (2) summary
    COG4886
    Location:155 → 342
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:164 → 186
    LRR_RI; leucine-rich repeat [structural motif]

  4. XM_038483198.1 → XP_038339126.1  leucine-rich repeat protein 1 isoform X2

    Conserved Domains (2) summary
    COG4886
    Location:114 → 301
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:123 → 145
    LRR_RI; leucine-rich repeat [structural motif]

  5. XM_038483197.1 → XP_038339125.1  leucine-rich repeat protein 1 isoform X2

    Conserved Domains (2) summary
    COG4886
    Location:114 → 301
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:123 → 145
    LRR_RI; leucine-rich repeat [structural motif]

  6. XM_038483199.1 → XP_038339127.1  leucine-rich repeat protein 1 isoform X2

    Conserved Domains (2) summary
    COG4886
    Location:114 → 301
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:123 → 145
    LRR_RI; leucine-rich repeat [structural motif]

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

    Range
    26136640..26148911
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038608776.1 → XP_038464704.1  leucine-rich repeat protein 1 isoform X4

  2. XM_038608775.1 → XP_038464703.1  leucine-rich repeat protein 1 isoform X3

    Conserved Domains (2) summary
    COG4886
    Location:149 → 352
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:164 → 186
    LRR_RI; leucine-rich repeat [structural motif]

  3. XM_038608771.1 → XP_038464699.1  leucine-rich repeat protein 1 isoform X1

    Conserved Domains (2) summary
    COG4886
    Location:155 → 342
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:164 → 186
    LRR_RI; leucine-rich repeat [structural motif]

  4. XM_038608773.1 → XP_038464701.1  leucine-rich repeat protein 1 isoform X2

    Conserved Domains (2) summary
    COG4886
    Location:114 → 301
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:123 → 145
    LRR_RI; leucine-rich repeat [structural motif]

  5. XM_038608772.1 → XP_038464700.1  leucine-rich repeat protein 1 isoform X2

    Conserved Domains (2) summary
    COG4886
    Location:114 → 301
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:123 → 145
    LRR_RI; leucine-rich repeat [structural motif]

  6. XM_038608774.1 → XP_038464702.1  leucine-rich repeat protein 1 isoform X2

    Conserved Domains (2) summary
    COG4886
    Location:114 → 301
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:123 → 145
    LRR_RI; leucine-rich repeat [structural motif]

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

    Range
    26453770..26466044
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038544652.1 → XP_038400580.1  leucine-rich repeat protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0LBN6, A0A8I3MNX5, A0A8P0PLL8

  2. XM_038544651.1 → XP_038400579.1  leucine-rich repeat protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0L8U2
    Conserved Domains (2) summary
    COG4886
    Location:149 → 352
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:164 → 186
    LRR_RI; leucine-rich repeat [structural motif]

  3. XM_038544647.1 → XP_038400575.1  leucine-rich repeat protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LXF9, A0A8I3MMG7, A0A8P0NSQ0
    Conserved Domains (2) summary
    COG4886
    Location:155 → 342
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:164 → 186
    LRR_RI; leucine-rich repeat [structural motif]

  4. XM_038544649.1 → XP_038400577.1  leucine-rich repeat protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MMG7, A0A8P0NSQ0
    Conserved Domains (2) summary
    COG4886
    Location:114 → 301
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:123 → 145
    LRR_RI; leucine-rich repeat [structural motif]

  5. XM_038544648.1 → XP_038400576.1  leucine-rich repeat protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MMG7, A0A8P0NSQ0
    Conserved Domains (2) summary
    COG4886
    Location:114 → 301
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:123 → 145
    LRR_RI; leucine-rich repeat [structural motif]

  6. XM_038544650.1 → XP_038400578.1  leucine-rich repeat protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MMG7, A0A8P0NSQ0
    Conserved Domains (2) summary
    COG4886
    Location:114 → 301
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:123 → 145
    LRR_RI; leucine-rich repeat [structural motif]

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    25983543..25995818
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_858184.5 → XP_863277.1  leucine-rich repeat protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0LBN6, A0A8I3MNX5, A0A8P0PLL8

  2. XM_022421977.2 → XP_022277685.1  leucine-rich repeat protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0L8U2
    Conserved Domains (2) summary
    COG4886
    Location:149 → 352
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:164 → 186
    LRR_RI; leucine-rich repeat [structural motif]

  3. XM_547798.6 → XP_547798.2  leucine-rich repeat protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LXF9, A0A8I3MMG7, A0A8P0NSQ0
    Conserved Domains (2) summary
    COG4886
    Location:155 → 342
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:164 → 186
    LRR_RI; leucine-rich repeat [structural motif]

  4. XM_022421975.2 → XP_022277683.1  leucine-rich repeat protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MMG7, A0A8P0NSQ0
    Conserved Domains (2) summary
    COG4886
    Location:114 → 301
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:123 → 145
    LRR_RI; leucine-rich repeat [structural motif]

  5. XM_005623372.4 → XP_005623429.1  leucine-rich repeat protein 1 isoform X2

    See identical proteins and their annotated locations for XP_005623429.1

    UniProtKB/TrEMBL
    A0A8I3MMG7, A0A8P0NSQ0
    Conserved Domains (2) summary
    COG4886
    Location:114 → 301
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:123 → 145
    LRR_RI; leucine-rich repeat [structural motif]

  6. XM_022421976.2 → XP_022277684.1  leucine-rich repeat protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MMG7, A0A8P0NSQ0
    Conserved Domains (2) summary
    COG4886
    Location:114 → 301
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:123 → 145
    LRR_RI; leucine-rich repeat [structural motif]
Nucleotide Protein
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