U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NPY6R neuropeptide Y receptor Y6 (pseudogene) [ Homo sapiens (human) ]

Gene ID: 4888, updated on 22-Sep-2022

Summary

Official Symbol
NPY6Rprovided by HGNC
Official Full Name
neuropeptide Y receptor Y6 (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:7959
See related
Ensembl:ENSG00000226306 MIM:601770; AllianceGenome:HGNC:7959
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PP2; Y2B; NPY1RL; NPY6RP
Summary
Predicted to enable pancreatic polypeptide receptor activity and peptide YY receptor activity. Predicted to be involved in neuropeptide signaling pathway. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in heart (RPKM 55.5), duodenum (RPKM 9.3) and 5 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See NPY6R in Genome Data Viewer
Location:
5q31.2
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (137801193..137810751)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (138327615..138337173)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (137136882..137146440)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene kelch like family member 3 Neighboring gene VISTA enhancer hs2181 Neighboring gene heterogeneous nuclear ribonucleoprotein A0 Neighboring gene uncharacterized LOC107986368 Neighboring gene PKD2L2 divergent transcript Neighboring gene myotilin

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Pathways from PubChem

General gene information

Markers

Clone Names

  • FLJ52676, FLJ53561

Gene Ontology Provided by GOA

Function Evidence Code Pubs
NOT enables neuropeptide Y receptor activity IKR
Inferred from Key Residues
more info
PubMed 
enables neuropeptide binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables neuropeptide receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
NOT involved_in G protein-coupled receptor signaling pathway IKR
Inferred from Key Residues
more info
PubMed 
involved_in neuropeptide signaling pathway IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in neuron projection IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002713.3 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC106791, DC357138
    Related
    ENST00000510937.2

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    137801193..137810751
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    138327615..138337173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_024720.1: Suppressed sequence

    Description
    NG_024720.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.