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ARL13B ADP ribosylation factor like GTPase 13B [ Canis lupus familiaris (dog) ]

Gene ID: 487934, updated on 17-Aug-2024

Summary

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Official Symbol
ARL13Bprovided by VGNC
Official Full Name
ADP ribosylation factor like GTPase 13Bprovided by VGNC
Primary source
VGNC:VGNC:38106
See related
Ensembl:ENSCAFG00845030616
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 33
Exon count:
10
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 33 NC_051837.1 (1798026..1862534)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 33 NC_006615.4 (1878107..1942635)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 33 NC_049254.1 (1967145..2031460)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 33 NC_049293.1 (1707188..1771378)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 33 NC_049774.1 (1742070..1806566)

Chromosome 33 - NC_051837.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102154029 Neighboring gene uncharacterized LOC111093735 Neighboring gene protein S Neighboring gene syntaxin 19 Neighboring gene ubiquitin-conjugating enzyme E2 N-like Neighboring gene NOP2/Sun RNA methyltransferase 3 Neighboring gene uncharacterized LOC111093819

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in non-motile cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor localization to non-motile cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in motile cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in non-motile cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor-like protein 13B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051837.1 Reference ROS_Cfam_1.0

    Range
    1798026..1862534
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038444650.1 → XP_038300578.1  ADP-ribosylation factor-like protein 13B isoform X3

    UniProtKB/TrEMBL
    A0A8C0NQG3
    Conserved Domains (1) summary
    cd04161
    Location:1 → 164
    Arl2l1_Arl13_like; Arl2-like protein 1 (Arl2l1) and Arl13

  2. XM_038444648.1 → XP_038300576.1  ADP-ribosylation factor-like protein 13B isoform X1

    UniProtKB/TrEMBL
    A0A8C0NQG3, A0A8I3Q4T0
    Related
    ENSCAFP00845042685.1, ENSCAFT00845054325.1
    Conserved Domains (1) summary
    cd04161
    Location:23 → 189
    Arl2l1_Arl13_like; Arl2-like protein 1 (Arl2l1) and Arl13

  3. XM_038444649.1 → XP_038300577.1  ADP-ribosylation factor-like protein 13B isoform X2

    UniProtKB/TrEMBL
    A0A8I3SCR3
    Conserved Domains (1) summary
    cd04161
    Location:1 → 164
    Arl2l1_Arl13_like; Arl2-like protein 1 (Arl2l1) and Arl13

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049293.1 Alternate UMICH_Zoey_3.1

    Range
    1707188..1771378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038518990.1 → XP_038374918.1  ADP-ribosylation factor-like protein 13B isoform X3

  2. XM_038518988.1 → XP_038374916.1  ADP-ribosylation factor-like protein 13B isoform X1

    Conserved Domains (1) summary
    cd04161
    Location:23 → 189
    Arl2l1_Arl13_like; Arl2-like protein 1 (Arl2l1) and Arl13

  3. XM_038518989.1 → XP_038374917.1  ADP-ribosylation factor-like protein 13B isoform X2

    Conserved Domains (1) summary
    cd04161
    Location:1 → 164
    Arl2l1_Arl13_like; Arl2-like protein 1 (Arl2l1) and Arl13

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049774.1 Alternate UNSW_CanFamBas_1.0

    Range
    1742070..1806566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038646934.1 → XP_038502862.1  ADP-ribosylation factor-like protein 13B isoform X3

  2. XM_038646932.1 → XP_038502860.1  ADP-ribosylation factor-like protein 13B isoform X1

    Conserved Domains (1) summary
    cd04161
    Location:23 → 189
    Arl2l1_Arl13_like; Arl2-like protein 1 (Arl2l1) and Arl13

  3. XM_038646933.1 → XP_038502861.1  ADP-ribosylation factor-like protein 13B isoform X2

    Conserved Domains (1) summary
    cd04161
    Location:1 → 164
    Arl2l1_Arl13_like; Arl2-like protein 1 (Arl2l1) and Arl13

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049254.1 Alternate UU_Cfam_GSD_1.0

    Range
    1967145..2031460
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038582506.1 → XP_038438434.1  ADP-ribosylation factor-like protein 13B isoform X3

    UniProtKB/TrEMBL
    A0A8C0NQG3

  2. XM_038582504.1 → XP_038438432.1  ADP-ribosylation factor-like protein 13B isoform X1

    UniProtKB/TrEMBL
    A0A8C0NIW7, A0A8C0NQG3, A0A8C0QY84, A0A8P0NB37
    Conserved Domains (1) summary
    cd04161
    Location:23 → 189
    Arl2l1_Arl13_like; Arl2-like protein 1 (Arl2l1) and Arl13

  3. XM_038582505.1 → XP_038438433.1  ADP-ribosylation factor-like protein 13B isoform X2

    UniProtKB/TrEMBL
    A0A8I3SCR3
    Conserved Domains (1) summary
    cd04161
    Location:1 → 164
    Arl2l1_Arl13_like; Arl2-like protein 1 (Arl2l1) and Arl13

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006615.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    1878107..1942635
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005639344.4 → XP_005639401.1  ADP-ribosylation factor-like protein 13B isoform X3

    See identical proteins and their annotated locations for XP_005639401.1

    UniProtKB/TrEMBL
    A0A8C0NQG3
    Conserved Domains (1) summary
    cd04161
    Location:1 → 164
    Arl2l1_Arl13_like; Arl2-like protein 1 (Arl2l1) and Arl13

  2. XM_038462318.1 → XP_038318246.1  ADP-ribosylation factor-like protein 13B isoform X1

    UniProtKB/TrEMBL
    A0A8C0NIW7, A0A8C0NQG3, A0A8C0QY84, A0A8P0NB37
    Conserved Domains (1) summary
    cd04161
    Location:23 → 189
    Arl2l1_Arl13_like; Arl2-like protein 1 (Arl2l1) and Arl13

  3. XM_022413740.1 → XP_022269448.1  ADP-ribosylation factor-like protein 13B isoform X2

    UniProtKB/TrEMBL
    A0A8I3SCR3
    Conserved Domains (1) summary
    cd04161
    Location:1 → 164
    Arl2l1_Arl13_like; Arl2-like protein 1 (Arl2l1) and Arl13
Nucleotide Protein
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