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CLEC4G C-type lectin domain family 4 member G [ Canis lupus familiaris (dog) ]

Gene ID: 484999, updated on 17-Aug-2024

Summary

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Official Symbol
CLEC4Gprovided by VGNC
Official Full Name
C-type lectin domain family 4 member Gprovided by VGNC
Primary source
VGNC:VGNC:39333
See related
Ensembl:ENSCAFG00845028231
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See CLEC4G in Genome Data Viewer
Location:
chromosome: 20
Exon count:
10
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (53005016..53009106, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (52279523..52283613, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (52883279..52887375, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (52208486..52218901, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (52652069..52656165, complement)

Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit 5 Neighboring gene Fc epsilon receptor II Neighboring gene 40S ribosomal protein S29-like Neighboring gene 40S ribosomal protein S3a-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
C-type lectin domain family 4 member G
Names
C-type lectin superfamily 4, member G

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051824.1 Reference ROS_Cfam_1.0

    Range
    53005016..53009106 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038428795.1 → XP_038284723.1  C-type lectin domain family 4 member G isoform X2

    UniProtKB/TrEMBL
    A0A8C0LB12
    Conserved Domains (1) summary
    cl02432
    Location:174 → 289
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  2. XM_038428794.1 → XP_038284722.1  C-type lectin domain family 4 member G isoform X1

    UniProtKB/TrEMBL
    A0A8C0LB12, A0A8C0PHQ9, A0A8I3PZF9
    Related
    ENSCAFP00845039065.1, ENSCAFT00845049810.1
    Conserved Domains (1) summary
    cd03590
    Location:174 → 298
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049280.1 Alternate UMICH_Zoey_3.1

    Range
    52208486..52218901 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038504426.1 → XP_038360354.1  C-type lectin domain family 4 member G isoform X4

  2. XM_038504427.1 → XP_038360355.1  C-type lectin domain family 4 member G isoform X4

  3. XM_038504425.1 → XP_038360353.1  C-type lectin domain family 4 member G isoform X3

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

    Range
    52652069..52656165 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038631620.1 → XP_038487548.1  C-type lectin domain family 4 member G isoform X2

    Conserved Domains (1) summary
    cl02432
    Location:174 → 289
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  2. XM_038631619.1 → XP_038487547.1  C-type lectin domain family 4 member G isoform X1

    Conserved Domains (1) summary
    cd03590
    Location:174 → 298
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

    Range
    52883279..52887375 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038567472.1 → XP_038423400.1  C-type lectin domain family 4 member G isoform X2

    UniProtKB/TrEMBL
    A0A8C0LB12

  2. XM_038567471.1 → XP_038423399.1  C-type lectin domain family 4 member G isoform X1

    UniProtKB/TrEMBL
    A0A8C0LB12

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    52279523..52283613 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038455891.1 → XP_038311819.1  C-type lectin domain family 4 member G isoform X2

    UniProtKB/TrEMBL
    A0A8C0LB12
    Conserved Domains (1) summary
    cl02432
    Location:174 → 289
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  2. XM_005632943.4 → XP_005633000.1  C-type lectin domain family 4 member G isoform X1

    See identical proteins and their annotated locations for XP_005633000.1

    UniProtKB/TrEMBL
    A0A8C0LB12, A0A8C0PHQ9, A0A8I3PZF9
    Conserved Domains (1) summary
    cd03590
    Location:174 → 298
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
Nucleotide Protein
Heading Accession and Version

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