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RPA3 replication protein A3 [ Canis lupus familiaris (dog) ]

Gene ID: 481449, updated on 17-Aug-2024

Summary

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Official Symbol
RPA3provided by VGNC
Official Full Name
replication protein A3provided by VGNC
Primary source
VGNC:VGNC:45704
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
4
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 14 NC_051818.1 (23045005..23049117, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 14 NC_006596.4 (22805480..22809588, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 14 NC_049235.1 (23187728..23191835, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 14 NC_049274.1 (23197309..23201240, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 14 NC_049755.1 (22930101..22934209, complement)

Chromosome 14 - NC_051818.1Genomic Context describing neighboring genes Neighboring gene RNA-binding protein EWS-like Neighboring gene meiosis regulator for oocyte development Neighboring gene UBAP1-MVB12-associated (UMA)-domain containing protein 1 Neighboring gene uncharacterized LOC106559691 Neighboring gene uncharacterized LOC119866248 Neighboring gene glucocorticoid induced 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in base-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mismatch repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of DNA replication factor A complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
replication protein A 14 kDa subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051818.1 Reference ROS_Cfam_1.0

    Range
    23045005..23049117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038686549.1 → XP_038542477.1  replication protein A 14 kDa subunit

    UniProtKB/TrEMBL
    A0A8C0KC50, A0A8C0SS84
    Conserved Domains (1) summary
    pfam08661
    Location:5 → 113
    Rep_fac-A_3; Replication factor A protein 3

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049274.1 Alternate UMICH_Zoey_3.1

    Range
    23197309..23201240 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038494639.1 → XP_038350567.1  replication protein A 14 kDa subunit

    Conserved Domains (1) summary
    pfam08661
    Location:5 → 113
    Rep_fac-A_3; Replication factor A protein 3

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049755.1 Alternate UNSW_CanFamBas_1.0

    Range
    22930101..22934209 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038620858.1 → XP_038476786.1  replication protein A 14 kDa subunit

    Conserved Domains (1) summary
    pfam08661
    Location:5 → 113
    Rep_fac-A_3; Replication factor A protein 3

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049235.1 Alternate UU_Cfam_GSD_1.0

    Range
    23187728..23191835 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038556921.1 → XP_038412849.1  replication protein A 14 kDa subunit

    UniProtKB/TrEMBL
    A0A8C0KC50, A0A8C0SS84
    Conserved Domains (1) summary
    pfam08661
    Location:5 → 113
    Rep_fac-A_3; Replication factor A protein 3

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006596.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    22805480..22809588 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_538570.6 → XP_538570.2  replication protein A 14 kDa subunit

    UniProtKB/TrEMBL
    A0A8C0KC50, A0A8C0SS84
    Conserved Domains (1) summary
    pfam08661
    Location:5 → 113
    Rep_fac-A_3; Replication factor A protein 3
Nucleotide Protein
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