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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051809.1 Reference ROS_Cfam_1.0
- Range
-
32509534..32535275
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038665397.1 → XP_038521325.1 DNA-directed RNA polymerase II subunit RPB1
- UniProtKB/TrEMBL
- A0A8C0NBD0, A0A8C0QXL5, A0A8I3PKJ4
- Related
- ENSCAFP00845031290.1, ENSCAFT00845039960.1
- Conserved Domains (5) summary
-
- cd02584
Location:1058 → 1476
- RNAP_II_Rpb1_C; Largest subunit (Rpb1) of Eukaryotic RNA polymerase II (RNAP II), C-terminal domain
- smart01104
Location:1491 → 1610
- CTD; Spt5 C-terminal nonapeptide repeat binding Spt4
- cd02733
Location:19 → 876
- RNAP_II_RPB1_N; Largest subunit (Rpb1) of eukaryotic RNA polymerase II (RNAP II), N-terminal domain
- pfam05109
Location:1854 → 1959
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- pfam04992
Location:896 → 1079
- RNA_pol_Rpb1_6; RNA polymerase Rpb1, domain 6
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049265.1 Alternate UMICH_Zoey_3.1
- Range
-
32474744..32500516
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038475501.1 → XP_038331429.1 DNA-directed RNA polymerase II subunit RPB1
- Conserved Domains (5) summary
-
- cd02584
Location:1058 → 1476
- RNAP_II_Rpb1_C; Largest subunit (Rpb1) of Eukaryotic RNA polymerase II (RNAP II), C-terminal domain
- smart01104
Location:1491 → 1610
- CTD; Spt5 C-terminal nonapeptide repeat binding Spt4
- cd02733
Location:19 → 876
- RNAP_II_RPB1_N; Largest subunit (Rpb1) of eukaryotic RNA polymerase II (RNAP II), N-terminal domain
- pfam05109
Location:1854 → 1959
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- pfam04992
Location:896 → 1079
- RNA_pol_Rpb1_6; RNA polymerase Rpb1, domain 6
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049746.1 Alternate UNSW_CanFamBas_1.0
- Range
-
32433445..32459212
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038600875.1 → XP_038456803.1 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049226.1 Alternate UU_Cfam_GSD_1.0
- Range
-
32610752..32636501
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038536674.1 → XP_038392602.1 DNA-directed RNA polymerase II subunit RPB1
- UniProtKB/TrEMBL
- A0A8C0NBD0, A0A8C0QXL5, A0A8I3PKJ4
- Conserved Domains (5) summary
-
- cd02584
Location:1058 → 1476
- RNAP_II_Rpb1_C; Largest subunit (Rpb1) of Eukaryotic RNA polymerase II (RNAP II), C-terminal domain
- smart01104
Location:1491 → 1610
- CTD; Spt5 C-terminal nonapeptide repeat binding Spt4
- cd02733
Location:19 → 876
- RNAP_II_RPB1_N; Largest subunit (Rpb1) of eukaryotic RNA polymerase II (RNAP II), N-terminal domain
- pfam05109
Location:1854 → 1959
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- pfam04992
Location:896 → 1079
- RNA_pol_Rpb1_6; RNA polymerase Rpb1, domain 6
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
32541944..32567696
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_852751.5 → XP_857844.4 DNA-directed RNA polymerase II subunit RPB1
- UniProtKB/TrEMBL
- A0A8C0NBD0, A0A8C0QXL5, A0A8I3PKJ4
- Conserved Domains (5) summary
-
- cd02584
Location:1058 → 1476
- RNAP_II_Rpb1_C; Largest subunit (Rpb1) of Eukaryotic RNA polymerase II (RNAP II), C-terminal domain
- smart01104
Location:1491 → 1610
- CTD; Spt5 C-terminal nonapeptide repeat binding Spt4
- cd02733
Location:19 → 876
- RNAP_II_RPB1_N; Largest subunit (Rpb1) of eukaryotic RNA polymerase II (RNAP II), N-terminal domain
- pfam05109
Location:1854 → 1959
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- pfam04992
Location:896 → 1079
- RNA_pol_Rpb1_6; RNA polymerase Rpb1, domain 6