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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001146099.1 → NP_001139571.1 serine/threonine-protein kinase Nek3 isoform b
See identical proteins and their annotated locations for NP_001139571.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an alternate exon in the central coding region, compared to variant 1. The resulting isoform (b) lacks an internal segment, compared to isoform a. This variant represents an alternate haplotype that lacks an 'A' at position 1253. This haplotype is not encoded by the reference assembly.
- Source sequence(s)
-
AB072828, AI026881, DA733733, DB185803
- UniProtKB/Swiss-Prot
-
P51956
- UniProtKB/TrEMBL
-
Q6ZN64
- Conserved Domains (1) summary
-
- cd08219
Location:3 → 257
- STKc_Nek3; Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 3
-
NM_001424254.1 → NP_001411183.1 serine/threonine-protein kinase Nek3 isoform c
Status: REVIEWED
- Source sequence(s)
-
AL139082, KF459684
- UniProtKB/TrEMBL
-
Q5JPB0
-
NM_001424255.1 → NP_001411184.1 serine/threonine-protein kinase Nek3 isoform d
Status: REVIEWED
- Source sequence(s)
-
AL139082, KF459684
- UniProtKB/TrEMBL
-
Q5JPB0
-
NM_001424257.1 → NP_001411186.1 serine/threonine-protein kinase Nek3 isoform d
Status: REVIEWED
- Source sequence(s)
-
AL139082, KF459684
- UniProtKB/TrEMBL
-
Q5JPB0
-
NM_001424259.1 → NP_001411188.1 serine/threonine-protein kinase Nek3 isoform e
Status: REVIEWED
- Source sequence(s)
-
AL139082, KF459684
-
NM_001424264.1 → NP_001411193.1 serine/threonine-protein kinase Nek3 isoform f
Status: REVIEWED
- Source sequence(s)
-
AL139082, KF459684
- UniProtKB/TrEMBL
-
Q5JPB0
-
NM_001424265.1 → NP_001411194.1 serine/threonine-protein kinase Nek3 isoform a
Status: REVIEWED
- Source sequence(s)
-
AL139082, KF459684
- UniProtKB/TrEMBL
-
Q5JPB0
-
NM_001424266.1 → NP_001411195.1 serine/threonine-protein kinase Nek3 isoform a
Status: REVIEWED
- Source sequence(s)
-
AL139082, KF459684
- UniProtKB/TrEMBL
-
Q5JPB0
-
NM_001424268.1 → NP_001411197.1 serine/threonine-protein kinase Nek3 isoform b
Status: REVIEWED
- Source sequence(s)
-
CP068265
- UniProtKB/TrEMBL
-
Q6ZN64
-
NM_001424269.1 → NP_001411198.1 serine/threonine-protein kinase Nek3 isoform b
Status: REVIEWED
- Source sequence(s)
-
CP068265
- UniProtKB/TrEMBL
-
Q6ZN64
-
NM_001424270.1 → NP_001411199.1 serine/threonine-protein kinase Nek3 isoform g
Status: REVIEWED
- Source sequence(s)
-
CP068265
- UniProtKB/TrEMBL
-
Q6ZN64
-
NM_001424271.1 → NP_001411200.1 serine/threonine-protein kinase Nek3 isoform h
Status: REVIEWED
- Source sequence(s)
-
CP068265
- UniProtKB/TrEMBL
-
Q6ZN64
-
NM_002498.3 → NP_002489.1 serine/threonine-protein kinase Nek3 isoform a
See identical proteins and their annotated locations for NP_002489.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript. Variants 1 and 2 encode the same isoform (a).
- Source sequence(s)
-
AL139082, BC019916
- Consensus CDS
-
CCDS73576.1
- UniProtKB/Swiss-Prot
- A8K2J4, P51956, Q5TAP2, Q8J023, Q8WUN5
- UniProtKB/TrEMBL
-
Q5JPB0
- Related
- ENSP00000480328.1, ENST00000610828.5
- Conserved Domains (1) summary
-
- cd08219
Location:3 → 257
- STKc_Nek3; Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 3
-
NM_152720.3 → NP_689933.1 serine/threonine-protein kinase Nek3 isoform a
See identical proteins and their annotated locations for NP_689933.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same isoform (a).
- Source sequence(s)
-
AI209040, AK131359, AK290259, AL139082, H15146
- Consensus CDS
-
CCDS73576.1
- UniProtKB/Swiss-Prot
- A8K2J4, P51956, Q5TAP2, Q8J023, Q8WUN5
- UniProtKB/TrEMBL
- Q5JPB0, Q6ZN64
- Related
- ENSP00000484443.1, ENST00000618534.4
- Conserved Domains (1) summary
-
- cd08219
Location:3 → 257
- STKc_Nek3; Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 3
RNA
-
NR_027415.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) represents the splice pattern of variant 1 but without the extra 'A' found in the GRCh38 haplotype. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL139082, AW364762, BM675414, BX395059, CV029372, DA407862, DB185803
-
NR_164641.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) represents the splice pattern of variant 3 but with the extra 'A' found in the GRCh38 haplotype. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL139082, KF459684
-
NR_172104.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) represents the splice pattern of variant 2 but without the extra 'A' found in the GRCh38 haplotype. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL139082, KF459684
-
NR_188248.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
CP068265
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000013.11 Reference GRCh38.p14 Primary Assembly
- Range
-
52132647..52159597 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060937.1 Alternate T2T-CHM13v2.0
- Range
-
51347476..51374692 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)