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JAZF1 JAZF zinc finger 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 472646, updated on 17-Aug-2024

Summary

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Official Symbol
JAZF1provided by VGNC
Official Full Name
JAZF zinc finger 1provided by VGNC
Primary source
VGNC:VGNC:4408
Locus tag
CK820_G0034587
See related
Ensembl:ENSPTRG00000019027
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See JAZF1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 6 NC_072404.2 (33630465..33981095, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 7 NC_072405.1 (31425745..31776315, complement)

Chromosome 6 - NC_072404.2Genomic Context describing neighboring genes Neighboring gene 3-hydroxyisobutyrate dehydrogenase Neighboring gene Tax1 binding protein 1 Neighboring gene uncharacterized LOC129144537 Neighboring gene U6 spliceosomal RNA Neighboring gene peptidyl-prolyl cis-trans isomerase A-like Neighboring gene cAMP responsive element binding protein 5 Neighboring gene uncharacterized LOC134810529

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
juxtaposed with another zinc finger protein 1
Names
juxtaposed with another zinc finger gene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072404.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    33630465..33981095 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001163921.4 → XP_001163921.1  juxtaposed with another zinc finger protein 1

    See identical proteins and their annotated locations for XP_001163921.1

    UniProtKB/TrEMBL
    A0A2I3T5Z8, A0A2J8KZ50, A0A6D2WZE0, H2R3G1
    Related
    ENSPTRP00000084665.1
    Conserved Domains (1) summary
    COG5189
    Location:169 → 230
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
Nucleotide Protein
Heading Accession and Version

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