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GRIA1 glutamate ionotropic receptor AMPA type subunit 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 471714, updated on 17-Aug-2024

Summary

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Official Symbol
GRIA1provided by VGNC
Official Full Name
glutamate ionotropic receptor AMPA type subunit 1provided by VGNC
Primary source
VGNC:VGNC:8622
Locus tag
CK820_G0010137
See related
Ensembl:ENSPTRG00000017441
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 4 NC_072402.2 (151167632..151511126)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 5 NC_072403.1 (151188397..151531923)

Chromosome 4 - NC_072402.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134810119 Neighboring gene neuromedin U receptor 2 Neighboring gene uncharacterized LOC129144035 Neighboring gene uncharacterized LOC107974741 Neighboring gene uncharacterized LOC112209202

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables AMPA glutamate receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AMPA glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendritic spine IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate receptor 1
Names
glutamate receptor, ionotropic, AMPA 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072402.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    151167632..151511126
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063811598.1 → XP_063667668.1  glutamate receptor 1 isoform X9

    UniProtKB/TrEMBL
    H2QRU7

  2. XM_054684728.2 → XP_054540703.1  glutamate receptor 1 isoform X3

    UniProtKB/TrEMBL
    A0A2J8NJY3

  3. XM_054684729.2 → XP_054540704.1  glutamate receptor 1 isoform X6

    UniProtKB/TrEMBL
    A0A2I3TR48, A0A2J8NJY7, A0A6D2W1V6

  4. XM_054684727.2 → XP_054540702.1  glutamate receptor 1 isoform X2

    UniProtKB/TrEMBL
    A0A2I3TR48, A0A2J8NJY7, A0A6D2W1V6

  5. XM_054684730.2 → XP_054540705.1  glutamate receptor 1 isoform X8

    UniProtKB/TrEMBL
    A0A2J8NJY3

  6. XM_054684726.2 → XP_054540701.1  glutamate receptor 1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8NJY3

  7. XM_054684731.2 → XP_054540706.1  glutamate receptor 1 isoform X12

    UniProtKB/TrEMBL
    A0A2J8NJY3

  8. XM_063811600.1 → XP_063667670.1  glutamate receptor 1 isoform X11

    UniProtKB/TrEMBL
    H2QRU7

  9. XM_063811601.1 → XP_063667671.1  glutamate receptor 1 isoform X12

    UniProtKB/TrEMBL
    A0A2J8NJY3

  10. XM_009450009.4 → XP_009448284.1  glutamate receptor 1 isoform X5

    See identical proteins and their annotated locations for XP_009448284.1

    UniProtKB/TrEMBL
    A0A2I3TR48, A0A2J8NJY7, A0A2J8NJZ1, A0A6D2W1V6, A0A803KI57, K7CQM1
    Related
    ENSPTRP00000029795.4
    Conserved Domains (2) summary
    cd13729
    Location:406 → 787
    PBP2_iGluR_AMPA_GluR1; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtype GluR1 of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    cd06390
    Location:26 → 392
    PBP1_iGluR_AMPA_GluR1; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the GluR1 subunit of the AMPA receptor

  11. XM_003310925.5 → XP_003310973.1  glutamate receptor 1 isoform X4

    See identical proteins and their annotated locations for XP_003310973.1

    UniProtKB/TrEMBL
    A0A2I3S455, A0A2J8NJY1, A0A2J8NJY3, A0A6D2XZW9
    Related
    ENSPTRP00000071800.1
    Conserved Domains (2) summary
    cd13729
    Location:406 → 787
    PBP2_iGluR_AMPA_GluR1; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtype GluR1 of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    cd06390
    Location:26 → 392
    PBP1_iGluR_AMPA_GluR1; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the GluR1 subunit of the AMPA receptor

  12. XM_054684732.2 → XP_054540707.1  glutamate receptor 1 isoform X13

    UniProtKB/TrEMBL
    A0A2I3SP74, A0A2J8NJY3, A0A2J8NJY5, A0A6D2X3X0

  13. XM_063811597.1 → XP_063667667.1  glutamate receptor 1 isoform X7

    UniProtKB/TrEMBL
    H2QRU7

  14. XM_063811599.1 → XP_063667669.1  glutamate receptor 1 isoform X10

    UniProtKB/TrEMBL
    A0A2J8NJY9, H2QRU7
Nucleotide Protein
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