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SELENBP1 selenium binding protein 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 469484, updated on 17-Aug-2024

Summary

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Official Symbol
SELENBP1provided by VGNC
Official Full Name
selenium binding protein 1provided by VGNC
Primary source
VGNC:VGNC:1538
Locus tag
CK820_G0047008
See related
Ensembl:ENSPTRG00000001287
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human all
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Genomic context

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See SELENBP1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (97833178..97841625)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (133508111..133516558, complement)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene pogo transposable element derived with ZNF domain Neighboring gene proteasome 20S subunit beta 4 Neighboring gene uncharacterized LOC104002674 Neighboring gene regulatory factor X5 Neighboring gene uncharacterized LOC107968336 Neighboring gene phosphatidylinositol 4-kinase beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables selenium binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
selenium-binding protein 1; methanethiol oxidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    97833178..97841625
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001172033.7 → XP_001172033.2  methanethiol oxidase isoform X2

    UniProtKB/TrEMBL
    A0A2I3SVC4, A0A2J8JJL7
    Related
    ENSPTRP00000080912.1
    Conserved Domains (1) summary
    pfam05694
    Location:7 → 472
    SBP56; 56kDa selenium binding protein (SBP56)

  2. XM_524867.7 → XP_524867.3  methanethiol oxidase isoform X1

    See identical proteins and their annotated locations for XP_524867.3

    UniProtKB/TrEMBL
    A0A2I3SVC4, A0A2J8JJK7, A0A6D2Y5S6, H2PZY9
    Related
    ENSPTRP00000002193.6
    Conserved Domains (1) summary
    pfam05694
    Location:49 → 514
    SBP56; 56kDa selenium binding protein (SBP56)

  3. XM_009431282.3 → XP_009429557.1  methanethiol oxidase isoform X1

    See identical proteins and their annotated locations for XP_009429557.1

    UniProtKB/TrEMBL
    A0A2I3SVC4, A0A2J8JJK7, A0A6D2Y5S6, H2PZY9
    Conserved Domains (1) summary
    pfam05694
    Location:49 → 514
    SBP56; 56kDa selenium binding protein (SBP56)
Nucleotide Protein
Heading Accession and Version

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