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GRINA glutamate ionotropic receptor NMDA type subunit associated protein 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 464455, updated on 17-Aug-2024

Summary

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Official Symbol
GRINAprovided by VGNC
Official Full Name
glutamate ionotropic receptor NMDA type subunit associated protein 1provided by VGNC
Primary source
VGNC:VGNC:7594
Locus tag
CK820_G0029283
See related
Ensembl:ENSPTRG00000020674
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 7 NC_072405.2 (154350169..154353593)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 8 NC_072406.1 (158948196..158951578)

Chromosome 7 - NC_072405.2Genomic Context describing neighboring genes Neighboring gene plectin Neighboring gene uncharacterized LOC134810698 Neighboring gene microRNA mir-661 Neighboring gene uncharacterized LOC129135801 Neighboring gene poly(ADP-ribose) polymerase family member 10 Neighboring gene spermatogenesis and centriole associated 1 Neighboring gene sphingomyelin phosphodiesterase 5-like Neighboring gene sphingomyelin phosphodiesterase 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein lifeguard 1
Names
glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
ionotropic glutamate receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001280140.1 → NP_001267069.1  protein lifeguard 1

    See identical proteins and their annotated locations for NP_001267069.1

    Status: PROVISIONAL

    Source sequence(s)
    AK306669
    UniProtKB/TrEMBL
    G2HIV5, H2QWV4, K7BS10
    Conserved Domains (3) summary
    cd10428
    Location:151 → 341
    LFG_like; Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis
    pfam02084
    Location:37 → 120
    Bindin; Bindin
    pfam15240
    Location:38 → 149
    Pro-rich; Proline-rich

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072405.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    154350169..154353593
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016958927.4 → XP_016814416.2  protein lifeguard 1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8LG72, A0A803KIL8, H2QWV4, K7BFS4, K7BS10
    Conserved Domains (2) summary
    cd10428
    Location:151 → 367
    LFG_like; Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis
    pfam15240
    Location:43 → 139
    Pro-rich; Proline-rich

  2. XM_016958928.4 → XP_016814417.2  protein lifeguard 1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8LG72, A0A803KIL8, H2QWV4, K7BFS4, K7BS10
    Conserved Domains (2) summary
    cd10428
    Location:151 → 367
    LFG_like; Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis
    pfam15240
    Location:43 → 139
    Pro-rich; Proline-rich

  3. XM_054656408.1 → XP_054512383.1  protein lifeguard 1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8LG72, A0A803KIL8, H2QWV4, K7BFS4, K7BS10

  4. XM_054656407.2 → XP_054512382.1  protein lifeguard 1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8LG72, A0A803KIL8, H2QWV4, K7BFS4, K7BS10
Nucleotide Protein
Heading Accession and Version

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