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Grina glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding) [ Mus musculus (house mouse) ]

Gene ID: 66168, updated on 16-Oct-2021

Summary

Official Symbol
Grinaprovided by MGI
Official Full Name
glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)provided by MGI
Primary source
MGI:MGI:1913418
See related
Ensembl:ENSMUSG00000022564
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Lag; Tmbim3; 1110025J15Rik
Expression
Ubiquitous expression in subcutaneous fat pad adult (RPKM 447.4), kidney adult (RPKM 386.4) and 28 other tissues See more
Orthologs
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Genomic context

See Grina in Genome Data Viewer
Location:
15 D3; 15
Exon count:
8
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (76130917..76134109)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (76246717..76249909)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (76077237..76080334)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene plectin Neighboring gene microRNA 1942 Neighboring gene poly (ADP-ribose) polymerase family, member 10 Neighboring gene microRNA 6953 Neighboring gene spermatogenesis and centriole associated 1 Neighboring gene myocardial infraction associated transcript 2 Neighboring gene microRNA 3079

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

General protein information

Preferred Names
protein lifeguard 1
Names
NMDA receptor glutamate-binding subunit
glutamate [NMDA] receptor-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_023168.3NP_075657.1  protein lifeguard 1

    See identical proteins and their annotated locations for NP_075657.1

    Status: PROVISIONAL

    Source sequence(s)
    AC110211
    Consensus CDS
    CCDS27563.1
    UniProtKB/Swiss-Prot
    Q9ESF4
    Related
    ENSMUSP00000023225.7, ENSMUST00000023225.8
    Conserved Domains (2) summary
    cd10428
    Location:128341
    LFG_like; Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis
    pfam15240
    Location:10114
    Pro-rich; Proline-rich

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    76130917..76134109
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030248690.1XP_030104550.1  protein lifeguard 1 isoform X1

    Conserved Domains (2) summary
    cd10428
    Location:128341
    LFG_like; Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis
    pfam15240
    Location:10114
    Pro-rich; Proline-rich
  2. XM_006521250.4XP_006521313.1  protein lifeguard 1 isoform X1

    See identical proteins and their annotated locations for XP_006521313.1

    UniProtKB/Swiss-Prot
    Q9ESF4
    Conserved Domains (2) summary
    cd10428
    Location:128341
    LFG_like; Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis
    pfam15240
    Location:10114
    Pro-rich; Proline-rich
  3. XM_006521251.4XP_006521314.1  protein lifeguard 1 isoform X1

    See identical proteins and their annotated locations for XP_006521314.1

    UniProtKB/Swiss-Prot
    Q9ESF4
    Conserved Domains (2) summary
    cd10428
    Location:128341
    LFG_like; Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis
    pfam15240
    Location:10114
    Pro-rich; Proline-rich
  4. XM_011245709.3XP_011244011.1  protein lifeguard 1 isoform X1

    See identical proteins and their annotated locations for XP_011244011.1

    UniProtKB/Swiss-Prot
    Q9ESF4
    Conserved Domains (2) summary
    cd10428
    Location:128341
    LFG_like; Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis
    pfam15240
    Location:10114
    Pro-rich; Proline-rich
  5. XM_006521249.4XP_006521312.1  protein lifeguard 1 isoform X1

    See identical proteins and their annotated locations for XP_006521312.1

    UniProtKB/Swiss-Prot
    Q9ESF4
    Conserved Domains (2) summary
    cd10428
    Location:128341
    LFG_like; Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis
    pfam15240
    Location:10114
    Pro-rich; Proline-rich
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