These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001114163.1 → NP_001107635.1  spliceosome RNA helicase DDX39B

   See identical proteins and their annotated locations for NP_001107635.1

   Status: PROVISIONAL

   Source sequence(s)

   AB210170

   UniProtKB/Swiss-Prot

   P60024, Q1XHY8

   UniProtKB/TrEMBL

   A0A2J8NXN4, A0A663DHA0, K6ZIR9, K7CIB1

   Related

   ENSPTRP00000084349.1, ENSPTRT00000093115.1

   Conserved Domains (2) summary

   cd18787
   Location:262 → 391

   SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases

   cd17950
   Location:44 → 251

   DEADc_DDX39; DEAD-box helicase domain of DEAD box protein 39

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

   Range

   37327398..37339306 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_009450854.4 → XP_009449129.2  spliceosome RNA helicase DDX39B isoform X2

   UniProtKB/Swiss-Prot

   P60024, Q1XHY8

   UniProtKB/TrEMBL

   A0A2J8NXN4, A0A663DHA0, K6ZIR9, K7CIB1

   Conserved Domains (2) summary

   cd18787
   Location:262 → 391

   SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases

   cd17950
   Location:44 → 251

   DEADc_DDX39; DEAD-box helicase domain of DEAD box protein 39

2. XM_009450852.4 → XP_009449127.2  spliceosome RNA helicase DDX39B isoform X2

   UniProtKB/Swiss-Prot

   P60024, Q1XHY8

   UniProtKB/TrEMBL

   A0A2J8NXN4, A0A663DHA0, K6ZIR9, K7CIB1

   Conserved Domains (2) summary

   cd18787
   Location:262 → 391

   SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases

   cd17950
   Location:44 → 251

   DEADc_DDX39; DEAD-box helicase domain of DEAD box protein 39

3. XM_063811963.1 → XP_063668033.1  spliceosome RNA helicase DDX39B isoform X2

   UniProtKB/Swiss-Prot

   P60024, Q1XHY8

   UniProtKB/TrEMBL

   A0A2J8NXN4, A0A663DHA0, K6ZIR9, K7CIB1

4. XM_009450850.4 → XP_009449125.2  spliceosome RNA helicase DDX39B isoform X1

   UniProtKB/TrEMBL

   K7CIB1

   Conserved Domains (3) summary

   PTZ00424
   Location:72 → 456

   PTZ00424; helicase 45; Provisional

   cd00079
   Location:302 → 428

   HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...

   cd00268
   Location:85 → 288

   DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...