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OCIAD2 OCIA domain containing 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 461338, updated on 29-Mar-2024

Summary

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Official Symbol
OCIAD2provided by VGNC
Official Full Name
OCIA domain containing 2provided by VGNC
Primary source
VGNC:VGNC:744
Locus tag
CK820_G0033398
See related
Ensembl:ENSPTRG00000016048
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See OCIAD2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 3 NC_072401.2 (82324803..82346259)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 4 NC_072402.1 (82324662..82346234)

Chromosome 3 - NC_072401.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA70 Neighboring gene U6 spliceosomal RNA Neighboring gene OCIA domain containing 1 Neighboring gene FRY like transcription coactivator Neighboring gene U5 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
OCIA domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072401.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    82324803..82346259
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003310394.7 → XP_003310442.1  OCIA domain-containing protein 2 isoform X1

    See identical proteins and their annotated locations for XP_003310442.1

    UniProtKB/TrEMBL
    A0A2J8L395, A0A6D2W6C3, H2RA22
    Related
    ENSPTRP00000053446.2
    Conserved Domains (1) summary
    pfam07051
    Location:33 → 117
    OCIA; Ovarian carcinoma immunoreactive antigen (OCIA)

  2. XM_063808894.1 → XP_063664964.1  OCIA domain-containing protein 2 isoform X5

  3. XM_063808893.1 → XP_063664963.1  OCIA domain-containing protein 2 isoform X2

  4. XM_009447932.5 → XP_009446207.1  OCIA domain-containing protein 2 isoform X4

    Conserved Domains (1) summary
    pfam07051
    Location:15 → 73
    OCIA; Ovarian carcinoma immunoreactive antigen (OCIA)

  5. XM_054683148.2 → XP_054539123.1  OCIA domain-containing protein 2 isoform X3

Nucleotide Protein
Heading Accession and Version

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