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TSHZ1 teashirt zinc finger homeobox 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 455478, updated on 17-Aug-2024

Summary

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Official Symbol
TSHZ1provided by VGNC
Official Full Name
teashirt zinc finger homeobox 1provided by VGNC
Primary source
VGNC:VGNC:13294
Locus tag
CK820_G0035311
See related
Ensembl:ENSPTRG00000010120
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 17 NC_072415.2 (85265985..85345154)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 18 NC_072416.1 (84204143..84283148)

Chromosome 17 - NC_072415.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107969529 Neighboring gene uncharacterized LOC107969530 Neighboring gene prostaglandin reductase 3 Neighboring gene small integral membrane protein 21 Neighboring gene small integral membrane protein 21 Neighboring gene uncharacterized LOC129137917

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
teashirt homolog 1
Names
teashirt family zinc finger 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072415.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    85265985..85345154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001137580.7 → XP_001137580.5  teashirt homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KWQ1

  2. XM_001137665.6 → XP_001137665.4  teashirt homolog 1 isoform X2

    UniProtKB/TrEMBL
    A0A2J8KWP9

  3. XM_024350942.3 → XP_024206710.3  teashirt homolog 1 isoform X2

    UniProtKB/TrEMBL
    A0A2J8KWP9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials