U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CD3D CD3 delta subunit of T-cell receptor complex [ Pan troglodytes (chimpanzee) ]

Gene ID: 451584, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
CD3Dprovided by VGNC
Official Full Name
CD3 delta subunit of T-cell receptor complexprovided by VGNC
Primary source
VGNC:VGNC:6481
Locus tag
CK820_G0015735
See related
Ensembl:ENSPTRG00000004339
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CD3D in Genome Data Viewer
Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 9 NC_072407.2 (120280508..120284121, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (119499712..119503367, complement)

Chromosome 9 - NC_072407.2Genomic Context describing neighboring genes Neighboring gene CD3 epsilon subunit of T-cell receptor complex Neighboring gene junction adhesion molecule like Neighboring gene myelin protein zero like 3 Neighboring gene myelin protein zero like 2 Neighboring gene CD3 gamma subunit of T-cell receptor complex Neighboring gene ubiquitination factor E4A

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive thymic T cell selection IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha-beta T cell receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
T-cell surface glycoprotein CD3 delta chain
Names
CD3d molecule, delta (CD3-TCR complex)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    120280508..120284121 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003313334.5 → XP_003313382.1  T-cell surface glycoprotein CD3 delta chain isoform X2

    UniProtKB/TrEMBL
    A0A2I3S4Y1, A0A2J8N2P0, A0A2J8N2Q0, A0A6D2X3H8
    Related
    ENSPTRP00000071892.1
    Conserved Domains (3) summary
    pfam02189
    Location:102 → 121
    ITAM; Immunoreceptor tyrosine-based activation motif
    cd00096
    Location:25 → 29
    Ig; Ig strand A [structural motif]
    cl11960
    Location:25 → 91
    Ig; Immunoglobulin domain

  2. XM_508789.8 → XP_508789.2  T-cell surface glycoprotein CD3 delta chain isoform X1

    See identical proteins and their annotated locations for XP_508789.2

    UniProtKB/TrEMBL
    A0A2J8N2P6, A0A6D2VSF1, H2Q4W0
    Related
    ENSPTRP00000007442.5
    Conserved Domains (2) summary
    pfam02189
    Location:146 → 165
    ITAM; Immunoreceptor tyrosine-based activation motif
    pfam16680
    Location:31 → 100
    Ig_4; T-cell surface glycoprotein CD3 delta chain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials