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SCD stearoyl-CoA desaturase [ Pan troglodytes (chimpanzee) ]

Gene ID: 450676, updated on 2-Nov-2023

Summary

Official Symbol
SCDprovided by VGNC
Official Full Name
stearoyl-CoA desaturaseprovided by VGNC
Primary source
VGNC:VGNC:10458
Locus tag
CK820_G0004138
See related
Ensembl:ENSPTRG00000002847
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See SCD in Genome Data Viewer
Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 10 NC_072408.1 (103063515..103081283)

Chromosome 10 - NC_072408.1Genomic Context describing neighboring genes Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 2 Neighboring gene polycystin 2 like 1, transient receptor potential cation channel Neighboring gene Wnt family member 8B Neighboring gene SEC31 homolog B, COPII coat complex component

Genomic regions, transcripts, and products

Genomic Sequence:
NC_072408.1 Chromosome 10 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables palmitoyl-CoA 9-desaturase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables stearoyl-CoA 9-desaturase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in response to fatty acid IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in unsaturated fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
stearoyl-CoA desaturase
Names
stearoyl-CoA desaturase (delta-9-desaturase)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072408.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    103063515..103081283
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001168563.6XP_001168563.1  stearoyl-CoA desaturase

    See identical proteins and their annotated locations for XP_001168563.1

    UniProtKB/TrEMBL
    A0A2I3S5X4, A0A2J8PDE4, A0A6D2XEW3, H2Q2F3
    Related
    ENSPTRP00000005002.2
    Conserved Domains (1) summary
    cd03505
    Location:100337
    Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...