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ATAD1 ATPase family AAA domain containing 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 450580, updated on 17-Aug-2024

Summary

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Official Symbol
ATAD1provided by VGNC
Official Full Name
ATPase family AAA domain containing 1provided by VGNC
Primary source
VGNC:VGNC:7840
Locus tag
CK820_G0004397
See related
Ensembl:ENSPTRG00000002717
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See ATAD1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 8 NC_072406.2 (99972573..100060721, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 10 NC_072408.1 (90593678..90665169, complement)

Chromosome 8 - NC_072406.2Genomic Context describing neighboring genes Neighboring gene small ribosomal subunit protein eS26-like Neighboring gene 3'-phosphoadenosine 5'-phosphosulfate synthase 2 Neighboring gene uncharacterized LOC107966785 Neighboring gene cofilin-1-like Neighboring gene killin, p53 regulated DNA replication inhibitor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extraction of mislocalized protein from mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
outer mitochondrial transmembrane helix translocase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072406.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    99972573..100060721 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063780852.1 → XP_063636922.1  outer mitochondrial transmembrane helix translocase isoform X1

    UniProtKB/TrEMBL
    A0A2I3S5Z1, A0A2I3STF3, A0A2J8PEG2, A0A6D2VWF5

  2. XM_054659758.2 → XP_054515733.1  outer mitochondrial transmembrane helix translocase isoform X5

    UniProtKB/TrEMBL
    H2Q278

  3. XM_016918815.4 → XP_016774304.1  outer mitochondrial transmembrane helix translocase isoform X1

    UniProtKB/TrEMBL
    A0A2I3S5Z1, A0A2I3STF3, A0A2J8PEG2, A0A6D2VWF5
    Conserved Domains (2) summary
    pfam17862
    Location:282 → 321
    AAA_lid_3; AAA+ lid domain
    cd19520
    Location:92 → 257
    RecA-like_ATAD1; ATPase domain of ATPase family AAA domain-containing protein 1 and similar ATPase domains

  4. XM_063780858.1 → XP_063636928.1  outer mitochondrial transmembrane helix translocase isoform X5

    UniProtKB/TrEMBL
    H2Q278

  5. XM_009458909.5 → XP_009457184.1  outer mitochondrial transmembrane helix translocase isoform X1

    See identical proteins and their annotated locations for XP_009457184.1

    UniProtKB/TrEMBL
    A0A2I3S5Z1, A0A2I3STF3, A0A2J8PEG2, A0A6D2VWF5
    Related
    ENSPTRP00000072406.1
    Conserved Domains (2) summary
    pfam17862
    Location:282 → 321
    AAA_lid_3; AAA+ lid domain
    cd19520
    Location:92 → 257
    RecA-like_ATAD1; ATPase domain of ATPase family AAA domain-containing protein 1 and similar ATPase domains

  6. XM_009458908.5 → XP_009457183.1  outer mitochondrial transmembrane helix translocase isoform X1

    See identical proteins and their annotated locations for XP_009457183.1

    UniProtKB/TrEMBL
    A0A2I3S5Z1, A0A2I3STF3, A0A2J8PEG2, A0A6D2VWF5
    Conserved Domains (2) summary
    pfam17862
    Location:282 → 321
    AAA_lid_3; AAA+ lid domain
    cd19520
    Location:92 → 257
    RecA-like_ATAD1; ATPase domain of ATPase family AAA domain-containing protein 1 and similar ATPase domains

  7. XM_009458911.5 → XP_009457186.1  outer mitochondrial transmembrane helix translocase isoform X2

    See identical proteins and their annotated locations for XP_009457186.1

    UniProtKB/TrEMBL
    A0A2I3S5Z1
    Conserved Domains (2) summary
    pfam17862
    Location:252 → 291
    AAA_lid_3; AAA+ lid domain
    cl38936
    Location:92 → 232
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  8. XM_063780857.1 → XP_063636927.1  outer mitochondrial transmembrane helix translocase isoform X5

    UniProtKB/TrEMBL
    H2Q278

  9. XM_063780851.1 → XP_063636921.1  outer mitochondrial transmembrane helix translocase isoform X1

    UniProtKB/TrEMBL
    A0A2I3S5Z1, A0A2I3STF3, A0A2J8PEG2, A0A6D2VWF5

  10. XM_063780853.1 → XP_063636923.1  outer mitochondrial transmembrane helix translocase isoform X2

    UniProtKB/TrEMBL
    A0A2I3S5Z1

  11. XM_063780856.1 → XP_063636926.1  outer mitochondrial transmembrane helix translocase isoform X5

    UniProtKB/TrEMBL
    H2Q278

  12. XM_016918816.4 → XP_016774305.1  outer mitochondrial transmembrane helix translocase isoform X3

    UniProtKB/TrEMBL
    A0A2I3S5Z1

  13. XM_063780855.1 → XP_063636925.1  outer mitochondrial transmembrane helix translocase isoform X4

  14. XM_016918817.3 → XP_016774306.1  outer mitochondrial transmembrane helix translocase isoform X4

    Conserved Domains (2) summary
    smart00382
    Location:125 → 254
    AAA; ATPases associated with a variety of cellular activities
    pfam00004
    Location:129 → 257
    AAA; ATPase family associated with various cellular activities (AAA)

  15. XM_063780854.1 → XP_063636924.1  outer mitochondrial transmembrane helix translocase isoform X4

Nucleotide Protein
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