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PALD1 phosphatase domain containing paladin 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 450511, updated on 17-Aug-2024

Summary

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Official Symbol
PALD1provided by VGNC
Official Full Name
phosphatase domain containing paladin 1provided by VGNC
Primary source
VGNC:VGNC:57335
Locus tag
CK820_G0007938
See related
Ensembl:ENSPTRG00000002594
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 8 NC_072406.2 (82695465..82789313)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 10 NC_072408.1 (73309973..73408369)

Chromosome 8 - NC_072406.2Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4E binding protein 2 Neighboring gene nodal growth differentiation factor Neighboring gene perforin 1 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
paladin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072406.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    82695465..82789313
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054659686.2 → XP_054515661.1  paladin isoform X1

    UniProtKB/TrEMBL
    A0A2I3RUW6, A0A2J8NUU5

  2. XM_016918498.4 → XP_016773987.2  paladin isoform X1

    UniProtKB/TrEMBL
    A0A2I3RUW6, A0A2J8NUU5
    Conserved Domains (1) summary
    pfam14566
    Location:161 → 330
    PTPlike_phytase; Inositol hexakisphosphate

  3. XM_054659687.2 → XP_054515662.1  paladin isoform X2

    UniProtKB/TrEMBL
    A0A2I3RUW6

  4. XM_016918499.4 → XP_016773988.2  paladin isoform X3

    UniProtKB/TrEMBL
    A0A2I3RUW6
    Conserved Domains (1) summary
    pfam14566
    Location:161 → 330
    PTPlike_phytase; Inositol hexakisphosphate
Nucleotide Protein
Heading Accession and Version

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