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CTNNB1 catenin beta 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 450183, updated on 2-Nov-2023

Summary

Official Symbol
CTNNB1provided by VGNC
Official Full Name
catenin beta 1provided by VGNC
Primary source
VGNC:VGNC:6197
Locus tag
CK820_G0005354
See related
Ensembl:ENSPTRG00000023062
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See CTNNB1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (45211787..45252877)

Chromosome 3 - NC_072401.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L5-like Neighboring gene elongation factor 1-gamma-like Neighboring gene unc-51 like kinase 4 Neighboring gene rRNA-processing protein FCF1 homolog Neighboring gene V-type proton ATPase subunit e 1-like

Genomic regions, transcripts, and products

Genomic Sequence:
NC_072401.1 Chromosome 3 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-catenin binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of catenin complex IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
catenin beta-1
Names
catenin (cadherin-associated protein), beta 1, 88kDa
catenin beta 1 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072401.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    45211787..45252877
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016940796.3XP_016796285.1  catenin beta-1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8PB47, A0A6D2WZ75, H2R2U1, K7BHG5
    Conserved Domains (4) summary
    smart00185
    Location:350390
    ARM; Armadillo/beta-catenin-like repeats
    COG5064
    Location:142431
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
    sd00043
    Location:402427
    ARM; armadillo repeat [structural motif]
    pfam00514
    Location:583622
    Arm; Armadillo/beta-catenin-like repeat
  2. XM_016940799.3XP_016796288.1  catenin beta-1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8PB47, A0A6D2WZ75, H2R2U1, K7BHG5
    Conserved Domains (4) summary
    smart00185
    Location:350390
    ARM; Armadillo/beta-catenin-like repeats
    COG5064
    Location:142431
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
    sd00043
    Location:402427
    ARM; armadillo repeat [structural motif]
    pfam00514
    Location:583622
    Arm; Armadillo/beta-catenin-like repeat
  3. XM_016940795.3XP_016796284.1  catenin beta-1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8PB47, A0A6D2WZ75, H2R2U1, K7BHG5
    Conserved Domains (4) summary
    smart00185
    Location:350390
    ARM; Armadillo/beta-catenin-like repeats
    COG5064
    Location:142431
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
    sd00043
    Location:402427
    ARM; armadillo repeat [structural motif]
    pfam00514
    Location:583622
    Arm; Armadillo/beta-catenin-like repeat
  4. XM_054680572.1XP_054536547.1  catenin beta-1 isoform X2

    UniProtKB/TrEMBL
    A0A2I3SBG5, A0A2J8PB43, A0A6D2XCK0, K7BHG5