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MGC82989 MGC82989 protein [ Xenopus laevis (African clawed frog) ]

Gene ID: 444414, updated on 18-Aug-2023

Summary

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Gene symbol
MGC82989
Gene description
MGC82989 protein
Locus tag
XELAEV_18013978mg
See related
EnsemblRapid:ENSXLAG00005013316
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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Location:
chromosome: 2L
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (190834373..190846928)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (173756441..173769374)

Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene dynein heavy chain domain-containing protein 1 Neighboring gene ribosomal RNA processing 8 L homeolog Neighboring gene tripeptidyl peptidase I L homeolog Neighboring gene translation initiation factor IF-2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
Integrin-linked protein kinase; MGC82989 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092516.1 → NP_001085985.1  Integrin-linked protein kinase

    See identical proteins and their annotated locations for NP_001085985.1

    Status: PROVISIONAL

    Source sequence(s)
    BC073649
    UniProtKB/TrEMBL
    A0A974HZW7, Q6GN69
    Related
    ENSXLAP00005039315.1, ENSXLAT00005040236.1
    Conserved Domains (3) summary
    COG0666
    Location:27 → 162
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd14057
    Location:197 → 449
    PK_ILK; Pseudokinase domain of Integrin Linked Kinase
    sd00045
    Location:33 → 64
    ANK; ANK repeat [structural motif]

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    190834373..190846928
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041580994.1 → XP_041436928.1  MGC82989 protein isoform X1

    UniProtKB/TrEMBL
    A0A974HZW7, Q6GN69
    Conserved Domains (3) summary
    COG0666
    Location:27 → 162
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd14057
    Location:197 → 449
    PK_ILK; Pseudokinase domain of Integrin Linked Kinase
    sd00045
    Location:33 → 64
    ANK; ANK repeat [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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