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serinc3.L serine incorporator 3 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444306, updated on 7-Sep-2023

Summary

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Official Symbol
serinc3.L
Official Full Name
serine incorporator 3 L homeolog
Primary source
Xenbase:XB-GENE-950526
Locus tag
XELAEV_18043397mg
See related
EnsemblRapid:ENSXLAG00005036656
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
tde; tde1; tms1; aigp1; tms-1; diff33; sbbi99; serinc3
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Genomic context

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Location:
chromosome: 9_10L
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (8263306..8275922, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (8235236..8247873, complement)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene R3H domain containing-like L homeolog Neighboring gene hepatocyte nuclear factor 4 alpha L homeolog Neighboring gene prostaglandin I2 (prostacyclin) synthase L homeolog Neighboring gene potassium channel, voltage gated Shab related subfamily B, member 1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC80979

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
serine incorporator 3 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092410.1 → NP_001085879.1  serine incorporator 3 L homeolog precursor

    See identical proteins and their annotated locations for NP_001085879.1

    Status: PROVISIONAL

    Source sequence(s)
    BC073465
    UniProtKB/TrEMBL
    A0A974BX37, Q6GNN9
    Related
    ENSXLAP00005109850.1, ENSXLAT00005112052.1
    Conserved Domains (1) summary
    pfam03348
    Location:17 → 468
    Serinc; Serine incorporator (Serinc)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    8263306..8275922 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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