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rabl3.S RAB, member of RAS oncogene family-like 3 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444046, updated on 11-Apr-2024

Summary

Official Symbol
rabl3.S
Official Full Name
RAB, member of RAS oncogene family-like 3 S homeolog
Primary source
Xenbase:XB-GENE-6256255
Locus tag
XELAEV_18014446mg
See related
EnsemblRapid:ENSXLAG00005024130
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
rabl3; rabl3.L
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Genomic context

Location:
chromosome: 2S
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (28218392..28223136)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (28134540..28139284)

Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene syntaxin binding protein 5L S homeolog Neighboring gene general transcription factor IIE subunit 1-like Neighboring gene homogentisate 1,2-dioxygenase-like Neighboring gene NADH:ubiquinone oxidoreductase subunit B4 S homeolog Neighboring gene protein kinase C delta type-like

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC82648

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTP binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein homodimerization activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within B cell differentiation ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within T cell differentiation in thymus ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within natural killer cell differentiation ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within regulation of Ras protein signal transduction ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within regulation of protein lipidation ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
rab-like protein 3
Names
RAB, member of RAS oncogene family-like 3 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092151.1NP_001085620.1  rab-like protein 3

    See identical proteins and their annotated locations for NP_001085620.1

    Status: PROVISIONAL

    Source sequence(s)
    BC073035
    UniProtKB/Swiss-Prot
    Q6GPS4
    UniProtKB/TrEMBL
    A0A974DIW2
    Related
    ENSXLAP00005071537.1, ENSXLAT00005073084.1
    Conserved Domains (1) summary
    cd04102
    Location:7210
    RabL3; Rab GTPase-like family 3 (Rab-like3)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    28218392..28223136
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018248246.2XP_018103735.1  rab-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8J0UI70
    Related
    ENSXLAP00005071475.1, ENSXLAT00005073022.1