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UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 [ Ovis aries (sheep) ]

Gene ID: 443296, updated on 6-Jun-2024

Summary

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Gene symbol
UBA52
Gene description
ubiquitin A-52 residue ribosomal protein fusion product 1
See related
EnsemblRapid:ENSOARG00020004308
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Also known as
UBCEP2; OVUBQ-L40
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 5 NC_056058.1 (4424428..4426830, complement)

Chromosome 5 - NC_056058.1Genomic Context describing neighboring genes Neighboring gene cytokine receptor like factor 1 Neighboring gene required for excision 1-B domain containing Neighboring gene KxDL motif containing 1 Neighboring gene uncharacterized LOC114114983

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056058.1 Chromosome 5 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tag activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modification-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-ribosomal protein eL40 fusion protein
Names
60S ribosomal protein L40
CEP52
ubiqitin RPL40 fusion protein
ubiquitin-60S ribosomal protein L40

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001009286.1 → NP_001009286.1  ubiquitin-ribosomal protein eL40 fusion protein

    See identical proteins and their annotated locations for NP_001009286.1

    Status: PROVISIONAL

    Source sequence(s)
    AY563026
    UniProtKB/Swiss-Prot
    O46543, P0C276, Q6Q310
    UniProtKB/TrEMBL
    A0A836D2E6, W5P3M9
    Conserved Domains (2) summary
    cd01803
    Location:1 → 76
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
    pfam01020
    Location:79 → 126
    Ribosomal_L40e; Ribosomal L40e family

RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056058.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    4424428..4426830 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012177581.3 → XP_012032971.1  ubiquitin-ribosomal protein eL40 fusion protein isoform X2

    See identical proteins and their annotated locations for XP_012032971.1

    UniProtKB/Swiss-Prot
    O46543, P0C276, Q6Q310
    UniProtKB/TrEMBL
    A0A836D2E6, W5P3M9
    Related
    ENSOARP00020005441.1, ENSOART00020006603.2
    Conserved Domains (2) summary
    cd01803
    Location:1 → 76
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
    pfam01020
    Location:79 → 126
    Ribosomal_L40e; Ribosomal L40e family

  2. XM_060415322.1 → XP_060271305.1  ubiquitin-ribosomal protein eL40 fusion protein isoform X1

    UniProtKB/TrEMBL
    W5P3M9

  3. XM_042249397.1 → XP_042105331.1  ubiquitin-ribosomal protein eL40 fusion protein isoform X2

    UniProtKB/Swiss-Prot
    O46543, P0C276, Q6Q310
    UniProtKB/TrEMBL
    A0A836D2E6, W5P3M9
    Conserved Domains (2) summary
    cd01803
    Location:1 → 76
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
    pfam01020
    Location:79 → 126
    Ribosomal_L40e; Ribosomal L40e family
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0C276.2 GenPept UniProtKB/Swiss-Prot:P0C276

Gene LinkOut

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