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mrps26 mitochondrial ribosomal protein S26 [ Danio rerio (zebrafish) ]

Gene ID: 436691, updated on 12-Sep-2024

Summary

Official Symbol
mrps26provided by ZNC
Official Full Name
mitochondrial ribosomal protein S26provided by ZNC
Primary source
ZFIN:ZDB-GENE-040718-115
See related
Ensembl:ENSDARG00000039719 AllianceGenome:ZFIN:ZDB-GENE-040718-115
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:92670
Summary
Predicted to be located in mitochondrion and ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Orthologous to human MRPS26 (mitochondrial ribosomal protein S26). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 13
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 13 NC_007124.7 (9303554..9311185, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 13 NC_007124.6 (8971531..8979162, complement)

Chromosome 13 - NC_007124.7Genomic Context describing neighboring genes Neighboring gene PDZ serine protease domain-containing protein Neighboring gene degP_htrA_DO protease family protein Neighboring gene uncharacterized LOC101884142 Neighboring gene neuronal intermediate filament family member 2

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
part_of mitochondrial small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of mitochondrial small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
small ribosomal subunit protein mS26

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002418.1NP_001002418.1  small ribosomal subunit protein mS26

    See identical proteins and their annotated locations for NP_001002418.1

    Status: PROVISIONAL

    Source sequence(s)
    BC076154
    UniProtKB/TrEMBL
    A0A2R8Q5P3, F6PAP0, Q6DH29
    Related
    ENSDARP00000058055.4, ENSDART00000058056.5
    Conserved Domains (1) summary
    pfam14943
    Location:31200
    MRP-S26; Mitochondrial ribosome subunit S26

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007124.7 Reference GRCz11 Primary Assembly

    Range
    9303554..9311185 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394865.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    467563..475194 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)