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MPG N-methylpurine DNA glycosylase [ Homo sapiens (human) ]

Gene ID: 4350, updated on 7-Jun-2020

Summary

Official Symbol
MPGprovided by HGNC
Official Full Name
N-methylpurine DNA glycosylaseprovided by HGNC
Primary source
HGNC:HGNC:7211
See related
Ensembl:ENSG00000103152 MIM:156565
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
AAG; MDG; ADPG; APNG; Mid1; anpg; PIG11; PIG16; CRA36.1
Expression
Ubiquitous expression in prostate (RPKM 19.8), spleen (RPKM 17.9) and 25 other tissues See more
Orthologs

Genomic context

See MPG in Genome Data Viewer
Location:
16p13.3
Exon count:
6
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (77019..85851)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (127018..135850)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene small nuclear ribonucleoprotein U11/U12 subunit 25 Neighboring gene rhomboid 5 homolog 1 Neighboring gene alpha-globin locus control region Neighboring gene NPR3 like, GATOR1 complex subunit Neighboring gene uncharacterized LOC107983982 Neighboring gene hemoglobin subunit zeta

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

NHGRI GWAS Catalog

Description
Genome-wide association analysis of red blood cell traits in African Americans: the COGENT Network.
NHGRI GWA Catalog

HIV-1 interactions

Protein interactions

Protein Gene Interaction Pubs
Rev rev HIV-1 Rev is identified to have a physical interaction with N-methylpurine-DNA glycosylase (MPG) in human HEK293 and/or Jurkat cell lines by using affinity tagging and purification mass spectrometry analyses PubMed

Go to the HIV-1, Human Interaction Database

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA N-glycosylase activity TAS
Traceable Author Statement
more info
 
DNA-3-methyladenine glycosylase activity IEA
Inferred from Electronic Annotation
more info
 
DNA-3-methylguanine glycosylase activity IEA
Inferred from Electronic Annotation
more info
 
DNA-7-methyladenine glycosylase activity IEA
Inferred from Electronic Annotation
more info
 
DNA-7-methylguanine glycosylase activity IEA
Inferred from Electronic Annotation
more info
 
alkylbase DNA N-glycosylase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
damaged DNA binding TAS
Traceable Author Statement
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
DNA dealkylation involved in DNA repair TAS
Traceable Author Statement
more info
PubMed 
base-excision repair IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
depurination TAS
Traceable Author Statement
more info
 
Component Evidence Code Pubs
cytosol IDA
Inferred from Direct Assay
more info
 
mitochondrial nucleoid IEA
Inferred from Electronic Annotation
more info
 
nucleoplasm IDA
Inferred from Direct Assay
more info
 
nucleoplasm TAS
Traceable Author Statement
more info
 

General protein information

Preferred Names
DNA-3-methyladenine glycosylase
Names
3' end of the Mid1 gene, localized 68 kb upstream the humanzeta globin gene on 16p
3-alkyladenine DNA glycosylase
3-methyladenine DNA glycosidase
CRA36.1 (3-methyl-adenine DNA glycosylase)
N-methylpurine-DNA glycosylase, MPG
proliferation-inducing protein 11
proliferation-inducing protein 16
NP_001015052.1
NP_001015054.1
NP_002425.2
XP_024306050.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001015052.3NP_001015052.1  DNA-3-methyladenine glycosylase isoform b

    See identical proteins and their annotated locations for NP_001015052.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an exon in the 5' region and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (b) is shorter and has a distinct N-terminus, compared to isoform a.
    Source sequence(s)
    BC014991, BM796301
    Consensus CDS
    CCDS32345.1
    UniProtKB/Swiss-Prot
    P29372
    Related
    ENSP00000348809.3, ENST00000356432.7
    Conserved Domains (1) summary
    cd00540
    Location:85281
    AAG; Alkyladenine DNA glycosylase catalyzes the first step in base excision repair
  2. NM_001015054.2NP_001015054.1  DNA-3-methyladenine glycosylase isoform c

    See identical proteins and their annotated locations for NP_001015054.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' coding region and initiates translation at a downstream, in-frame start codon, compared to variant 1. The encoded isoform (c) has a shorter N-terminus, compared to isoform a.
    Source sequence(s)
    AW083039, AY258284, BG823448
    Consensus CDS
    CCDS42087.1
    UniProtKB/Swiss-Prot
    P29372
    Related
    ENSP00000380918.1, ENST00000397817.5
    Conserved Domains (1) summary
    cd00540
    Location:73269
    AAG; Alkyladenine DNA glycosylase catalyzes the first step in base excision repair
  3. NM_002434.4NP_002425.2  DNA-3-methyladenine glycosylase isoform a

    See identical proteins and their annotated locations for NP_002425.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a).
    Source sequence(s)
    AL520052, AY258284, BM796301
    Consensus CDS
    CCDS32346.1
    UniProtKB/Swiss-Prot
    P29372
    UniProtKB/TrEMBL
    Q1W6H1
    Related
    ENSP00000219431.4, ENST00000219431.4
    Conserved Domains (1) summary
    cd00540
    Location:90286
    AAG; Alkyladenine DNA glycosylase catalyzes the first step in base excision repair

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    77019..85851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024450282.1XP_024306050.1  DNA-3-methyladenine glycosylase isoform X1

    Conserved Domains (1) summary
    cd00540
    Location:90286
    AAG; Alkyladenine DNA glycosylase catalyzes the first step in base excision repair
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