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Tektip1 tektin bundle interacting protein 1 [ Mus musculus (house mouse) ]

Gene ID: 432479, updated on 5-Mar-2024

Summary

Official Symbol
Tektip1provided by MGI
Official Full Name
tektin bundle interacting protein 1provided by MGI
Primary source
MGI:MGI:1921072
See related
Ensembl:ENSMUSG00000020234 AllianceGenome:MGI:1921072
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2210409H10Rik; 4930404N11Rik; 5730551K18Rik
Summary
Is expressed in central nervous system; embryo; retina; retina inner nuclear layer; and retina outer nuclear layer. Orthologous to human C19orf71 (chromosome 19 open reading frame 71). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in stomach adult (RPKM 123.4), testis adult (RPKM 110.8) and 18 other tissues See more
Orthologs
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Genomic context

See Tektip1 in Genome Data Viewer
Location:
10 C1; 10 39.72 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (81199858..81201654, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (81364024..81365820, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene GIPC PDZ domain containing family, member 3 Neighboring gene STARR-positive B cell enhancer ABC_E1809 Neighboring gene high mobility group 20B Neighboring gene STARR-seq mESC enhancer starr_27329 Neighboring gene STARR-positive B cell enhancer ABC_E11448 Neighboring gene major facilitator superfamily domain containing 12 Neighboring gene fizzy and cell division cycle 20 related 1 Neighboring gene STARR-seq mESC enhancer starr_27331 Neighboring gene STARR-seq mESC enhancer starr_27332 Neighboring gene predicted gene, 48551 Neighboring gene microRNA 6913 Neighboring gene deoxyhypusine hydroxylase/monooxygenase

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in axonemal A tubule inner sheath IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell projection IEA
Inferred from Electronic Annotation
more info
 
is_active_in cellular_component ND
No biological Data available
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
tektin bundle-interacting protein 1
Names
uncharacterized protein C19orf71 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001014836.3NP_001014836.2  tektin bundle-interacting protein 1

    See identical proteins and their annotated locations for NP_001014836.2

    Status: VALIDATED

    Source sequence(s)
    BC145960, BU945663
    Consensus CDS
    CCDS24056.1
    UniProtKB/Swiss-Prot
    A6H6Q4, B9EI87, Q9D5N6
    Related
    ENSMUSP00000020456.5, ENSMUST00000020456.5
    Conserved Domains (1) summary
    pfam15041
    Location:23204
    DUF4531; Domain of unknown function (DUF4531)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    81199858..81201654 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)