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TEKTIP1 tektin bundle interacting protein 1 [ Homo sapiens (human) ]

Gene ID: 100128569, updated on 20-Aug-2022

Summary

Official Symbol
TEKTIP1provided by HGNC
Official Full Name
tektin bundle interacting protein 1provided by HGNC
Primary source
HGNC:HGNC:34496
See related
Ensembl:ENSG00000183397 AllianceGenome:HGNC:34496
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C19orf71
Expression
Broad expression in testis (RPKM 11.5), kidney (RPKM 8.9) and 24 other tissues See more
Orthologs
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Genomic context

See TEKTIP1 in Genome Data Viewer
Location:
19p13.3
Exon count:
5
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (3539174..3544030)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (3517345..3522201)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (3539172..3544028)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372245 Neighboring gene deoxyhypusine hydroxylase Neighboring gene fizzy and cell division cycle 20 related 1 Neighboring gene uncharacterized LOC124904617 Neighboring gene major facilitator superfamily domain containing 12 Neighboring gene Sharpr-MPRA regulatory region 8051 Neighboring gene uncharacterized LOC124904618 Neighboring gene high mobility group 20B

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in axonemal microtubule ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
tektin bundle interacting protein 1; uncharacterized protein C19orf71

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001135580.2NP_001129052.1  tektin bundle interacting protein 1

    See identical proteins and their annotated locations for NP_001129052.1

    Status: VALIDATED

    Source sequence(s)
    AI138384, BX396051, DY654838
    Consensus CDS
    CCDS45918.1
    UniProtKB/Swiss-Prot
    A6NCJ1
    Related
    ENSP00000327950.4, ENST00000329493.6
    Conserved Domains (1) summary
    pfam15041
    Location:23206
    DUF4531; Domain of unknown function (DUF4531)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    3539174..3544030
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011527596.4XP_011525898.1  uncharacterized protein C19orf71 isoform X2

    UniProtKB/TrEMBL
    A0A804HK34
    Related
    ENSP00000507755.1, ENST00000681976.1
    Conserved Domains (1) summary
    pfam15041
    Location:1153
    DUF4531; Domain of unknown function (DUF4531)
  2. XM_047437992.1XP_047293948.1  uncharacterized protein C19orf71 isoform X1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    3517345..3522201
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)