spout1.L SPOUT domain containing methyltransferase 1 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: spout1.L
Official Full Name: SPOUT domain containing methyltransferase 1 L homeolog
Primary source: Xenbase:XB-GENE-973347
Locus tag: XELAEV_18035688mg
See related: EnsemblRapid:ENSXLAG00005016130
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: c9orf114; c9orf114.L
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Genomic context

Location:: chromosome: 7L

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	7L	NC_054383.1 (98388351..98400473)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	7L	NC_030736.1 (88540706..88552826)

Chromosome 7L - NC_054383.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables miRNA binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within maintenance of centrosome location	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within miRNA processing	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in kinetochore	IEA Inferred from Electronic Annotation more info
located_in mitotic spindle	IEA Inferred from Electronic Annotation more info
located_in spindle pole centrosome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: uncharacterized protein LOC431981

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001091457.2 → NP_001084926.1 uncharacterized protein LOC431981

See identical proteins and their annotated locations for NP_001084926.1

Status: PREDICTED

Source sequence(s)

BC070663

UniProtKB/TrEMBL

A0A974CHG3, Q6NRR6

Related

ENSXLAP00005047506.1, ENSXLAT00005048617.1

Conserved Domains (1) summary

pfam02598
Location:73 → 361

Methyltrn_RNA_3; Putative RNA methyltransferase

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

98388351..98400473

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041568466.1 → XP_041424400.1 uncharacterized protein LOC431981 isoform X1

UniProtKB/TrEMBL

A0A8J1L732, A0A974CHG3

Related

ENSXLAP00005047514.1, ENSXLAT00005048624.1

Conserved Domains (1) summary

cd18086
Location:102 → 391

HsC9orf114-like; SPOUT superfamily RNA methyltransferase HsC9orf114-like