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LYRM4 LYR motif containing 4 [ Gallus gallus (chicken) ]

Gene ID: 420874, updated on 17-Aug-2024

Summary

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Symbol
LYRM4provided by CGNC
Full Name
LYR motif containing 4provided by CGNC
Primary source
CGNC:9706
See related
Ensembl:ENSGALG00010011015
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (65180302..65264786)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (65129817..65214160)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene phenylalanyl-tRNA synthetase 2, mitochondrial Neighboring gene transfer RNA proline (anticodon AGG) Neighboring gene transfer RNA proline (anticodon AGG) Neighboring gene protein phosphatase 1 regulatory subunit 3G Neighboring gene ribonuclease P/MRP subunit p40

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in iron-sulfur cluster assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of L-cysteine desulfurase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LYR motif-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001198888.2 → NP_001185817.1  LYR motif-containing protein 4

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000040
    UniProtKB/TrEMBL
    R4GGF7
    Conserved Domains (1) summary
    cd20264
    Location:8 → 76
    Complex1_LYR_LYRM4; LYR (leucine-tyrosine-arginine) motif found in LYR motif-containing protein 4 (LYRM4) and similar proteins

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    65180302..65264786
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015275893.4 → XP_015131379.1  LYR motif-containing protein 4 isoform X2

    Conserved Domains (1) summary
    pfam13232
    Location:7 → 73
    Complex1_LYR_1; Complex1_LYR-like

  2. XM_025147264.3 → XP_025003032.2  LYR motif-containing protein 4 isoform X4

    Conserved Domains (1) summary
    cl40429
    Location:8 → 29
    Complex1_LYR_SF; LYR (leucine-tyrosine-arginine) motif found in Complex1_LYR-like superfamily

  3. XM_015275892.4 → XP_015131378.1  LYR motif-containing protein 4 isoform X1

    Conserved Domains (1) summary
    pfam13232
    Location:7 → 73
    Complex1_LYR_1; Complex1_LYR-like

  4. XM_015275894.4 → XP_015131380.1  LYR motif-containing protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8V0Y332
    Related
    ENSGALP00010015013.1, ENSGALT00010026394.1
    Conserved Domains (1) summary
    pfam13232
    Location:7 → 67
    Complex1_LYR_1; Complex1_LYR-like

RNA

  1. XR_005854279.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    65129817..65214160
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046911424.1 → XP_046767380.1  LYR motif-containing protein 4 isoform X2

  2. XM_046911423.1 → XP_046767379.1  LYR motif-containing protein 4 isoform X1

  3. XM_046911425.1 → XP_046767381.1  LYR motif-containing protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8V0Y332

RNA

  1. XR_006933415.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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