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HERPUD2 HERPUD family member 2 [ Gallus gallus (chicken) ]

Gene ID: 420742, updated on 17-Aug-2024

Summary

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Symbol
HERPUD2provided by CGNC
Full Name
HERPUD family member 2provided by CGNC
Primary source
CGNC:9218
See related
Ensembl:ENSGALG00010019008
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (46930250..46948666)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (46977255..46995657)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene septin 7 Neighboring gene uncharacterized LOC101749468 Neighboring gene uncharacterized LOC121109543 Neighboring gene uncharacterized LOC101749729

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    46930250..46948666
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_418840.8 → XP_418840.2  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z2H0
    Related
    ENSGALP00010027410.1, ENSGALT00010046004.1
    Conserved Domains (1) summary
    cd17119
    Location:9 → 85
    Ubl_HERP2; ubiquitin-like (Ubl) domain found in homocysteine-inducible endoplasmic reticulum stress protein HERP2 and similar proteins

  2. XM_004939534.5 → XP_004939591.2  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZFS2
    Related
    ENSGALP00010027411.1, ENSGALT00010046007.1
    Conserved Domains (1) summary
    cl28922
    Location:9 → 59
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  3. XM_004939535.5 → XP_004939592.2  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein isoform X4

    Conserved Domains (1) summary
    cl28922
    Location:9 → 50
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  4. XM_046938130.1 → XP_046794086.1  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein isoform X2

    UniProtKB/TrEMBL
    A0A8V0Z9U1
    Related
    ENSGALP00010027408.1, ENSGALT00010046002.1

  5. XM_046938131.1 → XP_046794087.1  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein isoform X5

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    46977255..46995657
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040662628.2 → XP_040518562.1  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein isoform X1

    Conserved Domains (1) summary
    cd17119
    Location:9 → 85
    Ubl_HERP2; ubiquitin-like (Ubl) domain found in homocysteine-inducible endoplasmic reticulum stress protein HERP2 and similar proteins

  2. XM_040662629.2 → XP_040518563.1  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein isoform X3

    Conserved Domains (1) summary
    cl28922
    Location:9 → 59
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  3. XM_040662630.2 → XP_040518564.1  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein isoform X4

    Conserved Domains (1) summary
    cl28922
    Location:9 → 50
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  4. XM_046912531.1 → XP_046768487.1  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein isoform X2

  5. XM_046912532.1 → XP_046768488.1  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein isoform X5

Nucleotide Protein
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