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LEMD3 LEM domain containing 3 [ Gallus gallus (chicken) ]

Gene ID: 417832, updated on 17-Aug-2024

Summary

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Symbol
LEMD3provided by CGNC
Full Name
LEM domain containing 3provided by CGNC
Primary source
CGNC:7501
See related
Ensembl:ENSGALG00010012372
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (34065043..34114122)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (34413490..34462590)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 30 Neighboring gene WNT inhibitory factor 1 Neighboring gene methionine sulfoxide reductase B3 Neighboring gene high mobility group AT-hook 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear envelope organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inner nuclear membrane protein Man1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    34065043..34114122
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_416073.8 → XP_416073.5  inner nuclear membrane protein Man1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YHI1
    Related
    ENSGALP00010017233.1, ENSGALT00010029619.1
    Conserved Domains (2) summary
    cd12942
    Location:3 → 46
    LEM_Man1; LEM (Lap2/Emerin/Man1) domain found in inner nuclear membrane protein Man1
    TIGR01622
    Location:765 → 865
    SF-CC1; splicing factor, CC1-like family

  2. XM_015282755.4 → XP_015138241.2  inner nuclear membrane protein Man1 isoform X2

    Conserved Domains (2) summary
    cd12942
    Location:3 → 46
    LEM_Man1; LEM (Lap2/Emerin/Man1) domain found in inner nuclear membrane protein Man1
    TIGR01622
    Location:747 → 847
    SF-CC1; splicing factor, CC1-like family

RNA

  1. XR_005847929.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    34413490..34462590
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040662226.2 → XP_040518160.1  inner nuclear membrane protein Man1 isoform X1

    Conserved Domains (2) summary
    cd12942
    Location:3 → 46
    LEM_Man1; LEM (Lap2/Emerin/Man1) domain found in inner nuclear membrane protein Man1
    TIGR01622
    Location:763 → 863
    SF-CC1; splicing factor, CC1-like family

  2. XM_040662227.2 → XP_040518161.1  inner nuclear membrane protein Man1 isoform X2

    Conserved Domains (2) summary
    cd12942
    Location:3 → 46
    LEM_Man1; LEM (Lap2/Emerin/Man1) domain found in inner nuclear membrane protein Man1
    TIGR01622
    Location:745 → 845
    SF-CC1; splicing factor, CC1-like family

RNA

  1. XR_005845819.2 RNA Sequence

Nucleotide Protein
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