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ANKRD36C ankyrin repeat domain 36C [ Homo sapiens (human) ]

Gene ID: 400986, updated on 25-Jul-2021

Summary

Official Symbol
ANKRD36Cprovided by HGNC
Official Full Name
ankyrin repeat domain 36Cprovided by HGNC
Primary source
HGNC:HGNC:32946
See related
Ensembl:ENSG00000174501
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 4.6), bone marrow (RPKM 4.1) and 23 other tissues See more
Orthologs
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Genomic context

See ANKRD36C in Genome Data Viewer
Location:
2q11.1
Exon count:
89
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (95848932..95991824, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (96514680..96657572, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene glycerol-3-phosphate acyltransferase 2 pseudogene 1 Neighboring gene long intergenic non-protein coding RNA 342 Neighboring gene RNA, 7SL, cytoplasmic 210, pseudogene Neighboring gene fumarylacetoacetate hydrolase domain containing 2C, pseudogene Neighboring gene glycerol-3-phosphate acyltransferase 2, mitochondrial

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
ankyrin repeat domain-containing protein 36C
Names
protein immuno-reactive with anti-PTH polyclonal antibodies

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001310154.3NP_001297083.1  ankyrin repeat domain-containing protein 36C isoform 1

    See identical proteins and their annotated locations for NP_001297083.1

    Status: VALIDATED

    Source sequence(s)
    AC013272, AC073995
    Related
    ENSP00000403302.1, ENST00000456556.5
    Conserved Domains (6) summary
    cd00204
    Location:59184
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:69157
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:3685
    Ank_4; Ankyrin repeats (many copies)
    pfam14662
    Location:16201819
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    pfam14915
    Location:17402030
    CCDC144C; CCDC144C protein coiled-coil region
    sd00045
    Location:6695
    ANK; ANK repeat [structural motif]
  2. NM_001393982.1NP_001380911.1  ankyrin repeat domain-containing protein 36C isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC013272, AC073995
    Conserved Domains (5) summary
    PTZ00121
    Location:9461755
    PTZ00121; MAEBL; Provisional
    COG1196
    Location:15821944
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:18542119
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:6695
    ANK; ANK repeat [structural motif]
    cl39094
    Location:45249
    Ank_2; Ankyrin repeats (3 copies)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    95848932..95991824 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001010914.1: Suppressed sequence

    Description
    NM_001010914.1: This RefSeq was permanently suppressed because it is a nonsense-mediated decay candidate and may represent a partial CDS.
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